KEGG   Anoplopoma fimbria (sablefish): 129111519
Entry
129111519         CDS       T09102                                 
Name
(RefSeq) tubulin alpha chain
  KO
K07374  tubulin alpha
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04145  Phagosome
afb04210  Apoptosis
afb04530  Tight junction
afb04540  Gap junction
afb04814  Motor proteins
afb05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:afb00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    129111519
  09143 Cell growth and death
   04210 Apoptosis
    129111519
  09144 Cellular community - eukaryotes
   04530 Tight junction
    129111519
   04540 Gap junction
    129111519
  09142 Cell motility
   04814 Motor proteins
    129111519
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    129111519
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afb03019]
    129111519
   03036 Chromosome and associated proteins [BR:afb03036]
    129111519
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:afb04812]
    129111519
   04147 Exosome [BR:afb04147]
    129111519
Messenger RNA biogenesis [BR:afb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     129111519
Chromosome and associated proteins [BR:afb03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     129111519
Cytoskeleton proteins [BR:afb04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    129111519
Exosome [BR:afb04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   129111519
  Exosomal proteins of other body fluids (saliva and urine)
   129111519
  Exosomal proteins of colorectal cancer cells
   129111519
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 129111519
NCBI-ProteinID: XP_054479465
LinkDB
Position
22:complement(1421956..1425410)
AA seq 449 aa
MRECISMHVGQAGAQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVGEEDEGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatttctatgcatgtcggccaggccggagcccagatgggcaatgcatgc
tgggagctctactgtctggagcacggcatccagccggacggacagatgcccagcgacaag
accatcggcggaggagacgactccttcaacaccttcttcagtgagactggagccggcaaa
catgttcccagagccgtctttgtggatctggagccaacagtcatagatgaggtccgaaca
ggaacctaccgtcagctcttccaccccgagcagctgatcactggaaaggaggacgccgcc
aacaactacgcccgcggtcactacacagtcggaaaggagatcatcgacctggtgctggac
aggacacgcaaactggctgaccagtgcacagggctccagggtttcctcatcttccactcc
tttggaggaggaaccggctctggcttcacctctctgctgatggagcgtctctctgtcgac
tacggcaaaaagtcaaagcttgagtttgcagtttacccagctccccaggtgtccacagct
gtggtagagccttacaactccatcctcaccacccacaccaccctggagcactctgactgc
gccttcatggtggacaacgaggccatctacgacatctgccgcaggaacctggacatcgag
cgccccacctacaccaacctgaaccgtctgatcggacagatcgtctcctccatcaccgcc
tccctgcgctttgacggagccttgaacgtggacctgacggagttccagaccaacttggtg
ccctaccctcgtatccacttccctctggccacctacgccccggttatctcagcagagaag
gcctatcacgagcagctctcggtcgctgacatcaccaacgcctgcttcgagcccgccaac
cagatggtgaagtgtgaccctcgtcacggtaaatacatggcgtgctgcctcctgtaccgt
ggagacgtggtgcccaaagatgtcaactccgccatcgccaccatcaaaaccaagcgcacc
atccagtttgtggactggtgtcccaccggcttcaaggtgggcatcaactaccagcccccc
accgtggttcctggaggagacctggccaaggtgcagcgggccgtgtgcatgctgagcaac
accaccgccatcgccgaggcctgggctcgactcgaccacaagttcgacctgatgtacgcc
aagagggccttcgtccactggtacgtgggagaggggatggaggagggagagttctcagag
gccagagaggacatggccgccctggagaaggattacgaggaggtgggcaccgacagcgtt
ggggaggaggatgaaggagaggagtactag

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