Anoplopoma fimbria (sablefish): 129111538
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Entry
129111538 CDS
T09102
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04140
Autophagy - animal
afb04148
Efferocytosis
afb05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129111538 (vps16)
04148 Efferocytosis
129111538 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129111538 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129111538 (vps16)
Membrane trafficking [BR:
afb04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
129111538 (vps16)
Hops complex
129111538 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
129111538
NCBI-ProteinID:
XP_054479494
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All DBs
Position
22:complement(69567..82511)
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AA seq
834 aa
AA seq
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MAFITANWNPLGEAFYRKLELYEMCWNLRDGLRDSLVAAAPYGGPIALLREPHRRSPSSR
PQLEIYSASGVGIANFPWKSGPVVQLGWTVSDELLCIQEDGSVLIYDLFGSFKRHFSMGQ
EVVQSQVLEAKVFHSPYGTGVAIVTGSSRFTLATNIDDLKLRRLPEVPGLQGKPVCWVVL
TQDRQTKVLLSTGPELYILDNTSCTAVSPPGLGPQAGSIVHMSVSFSYKYLALFTDSGHL
WTGPSHLQDKLSEVDTKKTTPPKQMVWCRRPKSQQPSVVLMWDRLLMVAGVCHDTIQFPI
EDQCVLVGELDGVRIISSTNQELLQEVPLVCQDIFKIASMAPGALLLEAHREYEKSSQKA
DEYLREIKEQSMLGEAVRQCVEAAGHEYDTNTQKSLMRAASFGKCFLTDFSPDPFVSTCR
ELRVLNAVRESSVGLPLTHTQFKQMTLQVLIDRLVYRQFYPLAIEMCRYLKIPDYQGVSR
VLKHWASCKVQQKDLSDEAIARAVCVKVGDSPGVSYSHIAAKAYECGRTELAIKLLDFEA
RSGEQVPLLLKMKRSQLALSKAVESGDTDLVYTVVTYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKLQEQETLKDLYNQDDDHQELANYYVTASYREKRLENRLSLLQSAVDEYNKAKNE
FSAKATEEEMRLLRFQRKLDDEKGAGLLELSLQATMEALLALGLHKQAEQLYRDFRVPDK
RYWWLKLKSLAEKEEWEELEKFSKSKKSPIGYLAFVEVCMKSNNKYEAKKYVSKVTPEQR
VKAHLAISDLEGAADAAIERKNDSEMGAVLSRCSASDRLLIDRLNRARATAAKK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcatcacggccaactggaacccgctgggagaagctttctaccgtaagctcgag
ctgtatgagatgtgttggaacctgagggacggactccgagacagtctggtggctgcagct
ccttatggaggtccaatagctctactcagagaacctcacagacgttctcccagttctcgt
cctcagttggagatttattctgcgtctggagtcggcatcgccaacttcccctggaagagt
ggtccggtggtccagctgggttggacggtcagtgatgagctgttgtgtattcaggaggac
ggatcggttctgatctacgatctgttcggatcattcaagagacacttcagtatgggacag
gaagtggtccagagtcaggtgttggaagccaaagtgttccactctccttatggaacaggg
gtcgccatagtaacgggctcctcccgcttcaccttggcaaccaacattgatgacctgaag
ctccgaaggttacctgaagtcccaggtctacaagggaagccggtctgctgggtcgtcctc
actcaggacagacagactaaagtcctcctgtccaccggacctgaactctacatcctggac
aacacgtcctgtactgctgtgagtcctccaggtctcggtcctcaggctggcagtatcgtc
cacatgtctgtgtctttcagctataaatacctggctctcttcactgactctggacacctg
tggactggcccctcccatctccaggacaaactgagtgaagtcgacaccaaaaagacgaca
cctcccaaacagatggtgtggtgtcgcagaccaaagagtcagcagccgtctgtggtgttg
atgtgggacagactgctcatggtggccggagtctgtcacgacaccatccagttccccata
gaggaccagtgtgttttggtcggagagctggacggagttcgtattatcagctcgaccaat
caggagctgcttcaggaggttccactggtctgccaggacatcttcaaaatcgcttccatg
gctcctggagctctgctgctggaggcccacagagagtacgagaagtcgagtcagaaggct
gatgagtatctgagagagatcaaggagcaaagcatgctgggagaagcagtccgacagtgc
gtggaggcagcaggacacgaatacgacacaaacacccagaaatccctgatgagggcggca
tcctttgggaagtgtttcctgaccgacttcagtccggatccgtttgtgtcgacctgcaga
gaactccgagttctgaacgccgtcagagagagcagcgtggggctaccactcactcacact
caattcaaacagatgactctacaggtgctgatcgacaggttggtgtatcgacagttttat
ccgttagcgatagaaatgtgtcgttacctgaagattccagattatcagggagttagcaga
gtcctcaaacactgggcttcatgcaaggtgcagcagaaggacctatcagacgaggctata
gcccgtgcggtgtgtgtgaaggtgggagactcacctggagtttcttactcgcacatcgca
gctaaagcttatgaatgtggacgcaccgagctcgccatcaagctgttggactttgaggct
cggtcaggagagcaggttcctctgctgttgaagatgaagaggagtcagttggcactcagt
aaagctgtggagagtggagacactgacctagtttacaccgtggtgacgtacctgaagaac
gagatgaacagaggggacttcttcatgactctgaggaaccaaccggtggcactgagcctc
tacagacagttctgtaaacttcaggaacaagaaactctgaaggatctctataatcaggac
gatgaccaccaggaactcgccaactactacgtcactgctagttacagagagaagaggtta
gagaaccgtctgtctctgctgcagagcgctgtggacgagtacaacaaggccaagaacgag
ttctctgcaaaggccacagaggaggagatgcgtctcctacgtttccaacgcaaactcgac
gacgagaaaggggcggggctactggaactatctctgcaggccaccatggaggctctgctg
gctctaggactccacaaacaggcagaacagctgtacagagacttcagagtacctgacaaa
aggtattggtggttaaaactgaagtctctggcggagaaggaggagtgggaggagttggag
aagttctcgaagagcaagaagtctcccattggctacctggcgtttgttgaagtttgcatg
aagagcaacaacaagtacgaagccaagaagtatgtttccaaggtaacacctgagcagagg
gtcaaagctcacctggccatcagtgacctggagggagctgccgacgccgccatcgagaga
aagaatgattccgagatgggggcggtcctctccagatgctccgcctccgaccgcctgttg
attgacaggttgaaccgagccagagccactgctgccaaaaagtga
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