Anoplopoma fimbria (sablefish): 129111576
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Entry
129111576 CDS
T09102
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13
KO
K08331
autophagy-related protein 13
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04136
Autophagy - other
afb04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129111576 (atg13)
04136 Autophagy - other
129111576 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129111576 (atg13)
03029 Mitochondrial biogenesis [BR:
afb03029
]
129111576 (atg13)
Membrane trafficking [BR:
afb04131
]
Autophagy
Autophagosome formation proteins
ULK complex
129111576 (atg13)
Atg1 complex
129111576 (atg13)
Mitochondrial biogenesis [BR:
afb03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
129111576 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
129111576
NCBI-ProteinID:
XP_054479548
LinkDB
All DBs
Position
22:complement(6058094..6065220)
Genome browser
AA seq
505 aa
AA seq
DB search
MDSGLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSPTGSDWFNLAIKDIPEVT
HEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNRLS
VLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLSGLGEGFQTVRVGVVGTPVGT
VTLSCAYRTNLAFMSNRQFERSAPIMGIIVDHFVDPPGSGHRPANMGHLCNYRAPDDDDG
GQYAGVQDSQEVCTTSFSTSPPSQLYASRLSYHPPAQAGASELCHPAANQVLHAGKEHGG
VVLVPAQPPHGADAHLTAENAANTPGSSGDDDGLTHSGERRRDEGRRSVSPSDPVESLNA
FTRKIGAFVNKPNTPITAASLDLPFAAFAPRGLDSEENDPMVQPPDSPPCPSPLQASLHS
QGSEGSGQHDDFVMVDFRPAFSKDDLLPMDLGTFYREFQNPPQLASLSLHISAQSMADDL
DSLPEKLAVYEKNIDEFDAFVDMLQ
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggcctcagtccccaggataaaaaagacttggacaagttcattaagttcttt
gccttgaagactgtccaggtgattgtccaagctcgtcttggagagaagatctgcactcgc
tcgtcgcctactggctctgattggtttaatttggccatcaaagacatcccagaagtgact
catgaagccaagaaggcactggctggacaacttccaggcatcgggcgctccatgtgtgtc
gagatctccctgaagacgtcagagggtgactcaatggaattggagacatggtgcctggaa
atgaatgaaaagtgtgataaagacatcaaggtgtcatatacagtctacaaccgtctgtct
gtccttctgaagtctctcctggccatcaccagagtaacacccgcctataaactatccaga
aagcagggtcacgactatgttatattatacaggatctactttggggaagtccagctcagt
ggattaggagaaggttttcagacggtgcgtgtcggcgtcgttggcacccctgttggcact
gttacactttcatgcgcataccgcaccaacctggcattcatgtccaacagacagttcgag
cggtcggctccaatcatggggatcatcgtggatcactttgtggatcctcccggcagcggc
catcgtcctgccaacatggggcatctctgcaactacagagctccggatgatgacgatgga
ggacaatatgcaggggttcaagattcacaggaggtctgcaccacctccttctccacctcc
cctccctcacagctgtatgcttccaggttatcatatcatcctccagctcaagcaggagct
tctgagctctgtcaccctgctgcaaaccaggtgttgcatgctgggaaggagcatggaggg
gttgtgttggttcctgcccagcctcctcatggagctgatgctcatctgacagcagagaac
gctgccaacacacctggcagcagtggtgacgatgacgggctgacgcacagcggagagagg
aggagggatgaagggcggaggagcgtttctccctctgaccctgtggagtcgctcaacgca
ttcacgaggaagatcggagccttcgtcaataaacccaacacaccgatcacagcagccagt
ctggacctgccatttgctgcatttgctcctcgaggcctggactcagaggagaatgatccc
atggtgcagcctccagactctcctccttgcccctcacccctgcaggccagcctccattct
cagggctcagagggatcggggcagcatgatgactttgtcatggtcgactttcgtccagcc
ttctcgaaagacgacttgttgccgatggatctgggtactttctaccgagagtttcaaaac
ccccctcagctggccagcctctcactacacatcagcgcccagtcgatggccgatgacctg
gactcgctgccggagaagctggccgtttatgagaagaacatcgacgagtttgacgctttt
gtggacatgctccaatag
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integrated database retrieval system
