Anoplopoma fimbria (sablefish): 129111741
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Entry
129111741 CDS
T09102
Name
(RefSeq) high-affinity choline transporter 1-like isoform X1
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
129111741
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afb02000
]
129111741
Transporters [BR:
afb02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
129111741
SSDB
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Paralog
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Motif
Pfam:
SSF
FACT-Spt16_Nlob
Motif
Other DBs
NCBI-GeneID:
129111741
NCBI-ProteinID:
XP_054479796
LinkDB
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Position
22
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AA seq
552 aa
AA seq
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MALSVPGLIMMVAFYLLVLGIGIWASLKSKQMEKKSPGGRVEVSFLANRSVSLVVGVFTM
TATWVGGAFIIGIAELVYDPTKGLIWALVPLQTSIAFVIGGMFFAKPMRENNYISMMDPF
QRKYGKGLTAALAVVPVMTEVVWIPGLLISLGATMSVVIDLPFSVCVWISAVVAIIYTVL
GGLYSVAYTDVIQISLVFLSLWLCVPFVLTSDVYTDISETAFNRTYGGPWVGRLEYDDVG
IWIDNFLVMTLGNMAIQDFHQRTLSSRSTATARIICFIAAGAVIVVGIPSVLIGAVAAST
DWNATSYGSPSPYERGESAMVLPIILQNLTPTYIFAFGIGAIAAAVMSSADSYLLSATTI
FTTNIYQTIRSQASDKELQWVIRLSIVVAGLVGTSLTYLDSSIMVFWILGADLTYTIMLP
QLICVLFIRVSNGYGAVAGYVVAFVMRVLCGEPVFKLPVILAFPGCTLEDGVYVQRAPFK
TICMLSALTSILVFSYVASLLFNKGILPERWDVFKVKSQEELRPAEGAREADDEKTGLDD
KLACGPMLNTKF
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggctctcagtgtcccagggctcatcatgatggtggctttctacctgctggtgttggga
atcggcatctgggcgtctttgaagtctaagcagatggagaagaagagcccaggtggacgg
gtggaggtttcttttttggccaaccggagtgtgagcttggtggtgggggttttcacaatg
actgctacttgggttggaggtgcttttattattgggattgcagagttggtttatgacccc
actaagggtctaatctgggctctggttcctctgcaaacgtccatcgcatttgtcatcggt
ggaatgttctttgcaaagccaatgagggagaacaattacatcagtatgatggatccgttc
cagaggaagtatggaaaaggactgactgcggctcttgccgttgttccagtcatgactgaa
gttgtctggattcctggtttactcatttccttgggagcgaccatgagtgtggtcatcgat
ctgcccttcagtgtgtgcgtgtggatctctgccgtggtcgccatcatctacaccgtgctc
ggaggtctctattcagtcgcttacaccgatgtcatccagatctcactggtgtttctgagc
ttgtggctgtgtgtcccttttgttctgacgagtgacgtttatactgacatcagtgaaacg
gcgttcaaccgcacatacgggggcccctgggttggccggcttgagtatgatgacgtcggg
atatggattgataattttctagtgatgactttgggcaatatggccattcaggatttccat
cagaggacgctgtcctcccgctccactgccacagccaggatcatctgtttcatagcagca
ggagctgtcatcgttgtaggaatcccatctgtgctgatcggagctgttgcggcttcgaca
gactggaacgccacctcatacggttctccttctccatacgagcgaggggagtcggccatg
gtgttgcccatcatccttcagaatttaaccccgacctacatctttgcttttggcatcgga
gcgattgctgctgcagtgatgtcatctgctgactcttaccttctgtctgcaaccaccatc
ttcaccaccaacatctaccagaccatcaggagccaggcgtctgataaagagctgcagtgg
gtgatccgtctctccatcgtggtagcaggacttgtgggaacgtccctcacctacctggac
agcagcatcatggtgttctggatcctgggcgccgatctgacctacaccatcatgctccca
cagctgatctgcgtcctcttcatccgggtttccaacggttacggggccgttgcaggctat
gttgttgcctttgtcatgagggttttgtgcggagagcccgtgttcaagcttcctgtcatc
ctcgctttcccagggtgcactttagaggacggcgtttacgttcagcgcgctccgttcaag
accatctgcatgctgtctgctctgacctccatcctggtgttttcatatgtggcctctctg
ctgtttaacaaggggatccttcctgagaggtgggacgtgttcaaggtgaaatcacaggaa
gaactacgaccagcagagggcgccagagaggctgatgacgaaaagactggtctagatgat
aaacttgcctgtggaccaatgctgaacacaaaattctag
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