Anoplopoma fimbria (sablefish): 129111743
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Entry
129111743 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129111743
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
129111743
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
UBA_N4BP1_C
UBA_N4BP1
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
129111743
NCBI-ProteinID:
XP_054479799
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All DBs
Position
22:complement(11544517..11558962)
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AA seq
960 aa
AA seq
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MGQKDHVEAGAGHILDLGLDLEYLHVAGSDRQAGGSDGPPAMEEQGECSGSINAADSPPP
AGAEENAGSDAECEQPPSSSSATLPVSPEPDGGEEGLAHSKNAHQPLCRTQCVDLGTEGP
PELPSEPSPELEHESSPSSPCKHPPEPPPNPSSLETAPEAGGKEYQAKLEFALKLGYSEE
TVRLVLSKLGPDTLINDILGELVKLGTKSDSEQPAGSLASTSSSSSSSSSCGCSDLQDSQ
RSDSPCPSDSLSDQDNLRPIVVDGSNVAMSHGNKEVFSCQGIQLAVDWFVERGHHDITVF
VPAWRKEQSRPDAPITDQDVLRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDG
IIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKRPVM
PEQKKQPCPYGKKCTYGHKCKYYHPERGAQPQRAVADELRASAKTCVTTKNQGDAGLVKS
HSVPAGSIEAKKGAQKRQSDPSIRALSYSDAEEKLAKGRAESQKNGMCGSSSSSSGGKSV
TSAPGGPPSSFSHPQDRQSRAATPHSLPAPGHDLYPHCESPDLSYYSVTRAYSGLSLSSR
RSPDCRFPNDTDLRLGSMGSTGSECGSESSVSCGSSCDSYSERPCPGCPPETLVDDSVHF
PNPHSRLYPHHASANHELCGHHPADYSGMQHTHGSNAGVHGYHLGVARGQNCAHDQPPPE
APPKRPLYPLPPHLQHQPLTARSSCPGDYHSLPQSNPHXPGSPLGRCLAPTRGESVSDSH
LYDHLSASHHHHRTKALPGWDTYYRQPLLPPSRYETSAYQSLPDTRQASWHAPPWAQDGY
GQHHSSHPALHPSSTHYLNHPPPQAHSPHPPHPSSTPLQPYPSHSAQLAVPSHAPPSYMP
QHPESPAHSRYGDTREKVYVNLCNIFPSELVSRVMARSPHITDPQQLAAAILAEKAQTGY
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgggccagaaggaccatgtggaggcaggagcaggccacatcctcgacctggggctggat
ttggagtatctccacgtagcagggtctgaccggcaggctggcggctctgacgggccccct
gctatggaggagcagggggagtgctccgggagcatcaacgccgccgattcccctcctccc
gctggagcggaagaaaatgccgggtctgatgcagagtgcgagcagccgccgtcgtcgtcc
agcgccaccctccctgtcagccccgaaccggatggaggggaggaagggttagctcacagt
aagaacgcccaccagccgctttgtcggacccaatgtgtggacttgggcaccgagggtcca
cctgagctcccgtctgagccctcaccggagcttgaacacgagtcctcacccagctcgccg
tgcaagcacccaccagagcctcctcccaatccctcctcattagagacggcgcccgaggcc
ggcggcaaggagtatcaggctaagctggagtttgccctgaagctgggctactccgaggag
acggtgcgactggtgctatccaagcttggccctgacaccctcatcaatgacatactggga
gagctggtcaaactgggcaccaagtcggacagcgagcaaccggccggatcattagcctct
acctcatcttcatcttcctcctcttcctcttgcggctgttctgatttgcaggacagccag
aggtcggactcgccatgtccgtcagactctctgagcgaccaggacaacctgcggccgatt
gtggtggatggcagtaatgtagccatgagccatggcaacaaggaagtgttttcatgccag
gggatccagctggctgtggattggttcgtagagcggggtcatcatgacatcacggtgttt
gtgcctgcgtggaggaaagagcagtctcgccctgacgccccaataacagatcaggatgtc
ctgcgtcgcctagaaaaggaaaagatcctggtcttcactccttcgcggcgtgtccaaggt
cggcgcgtggtttgctatgacgaccgcttcatcgtcaagctggcctatgagtcagacggc
atcatcgtctccaacgataactaccgagacctggctaacgagaagcccgagtggaagaag
ttcatcgacgaacggctgctcatgtattcctttgtcaacgacaaattcatgcccccagat
gaccctcttggtcgtcatggccccagcttagacaacttcctgaggaaaagacctgtcatg
cctgagcagaagaaacagccttgcccatacggaaagaagtgcacttacggccacaagtgt
aagtactaccacccagaaagaggtgctcagcctcagcgtgctgtggccgatgagctgcgt
gccagcgccaagacctgtgtcaccacaaagaaccagggggatgctgggttggtgaagagc
cacagcgtgccagctggcagcattgaggcaaagaaaggcgcccagaaaaggcagtcggac
cccagcatccgagccctgtcgtacagcgatgccgaggagaagctggcaaaagggagggcg
gaaagccagaagaacggcatgtgtggcagcagcagcagtagtagcggaggtaaaagcgtg
acatcagccccaggaggccccccgtccagtttcagccatccccaggacaggcagtccaga
gcagcgactccccacagtctaccagcccccggccatgacctttaccctcactgcgagtct
ccagacttgagctactactcggtgacgcgcgcttactccggcctgagcctctcctccaga
cggagcccagactgtcgcttccccaacgacacggacctgcggctgggctccatgggctcg
acgggctccgaatgcggcagcgagagcagcgtgagttgcgggagcagctgcgactcgtac
agcgagaggccgtgtcccgggtgccccccagaaacgttggtggacgacagcgtccatttt
cctaacccccacagccggctgtatcctcaccatgcctcagcaaaccatgaactatgcggc
catcatcccgccgattactcgggcatgcagcacacccacgggtctaatgcaggagtacac
ggctaccacctgggtgtggcacgcggacagaactgtgctcacgaccagcctccaccagag
gctcctcccaagcgccctctctaccccttgccccctcatctccagcaccaaccgctgacc
gctcgctccagctgcccaggtgactaccactctctgccccagtccaaccctcacncccct
ggctctcctctgggccgctgcctggccccaacgcgaggagagagcgtgtcagactctcat
ctttatgaccacctctccgcatcgcaccatcaccaccggacaaaagctttgcccggctgg
gacacgtactacagacagcctctgctgccgccgtccaggtatgagacatctgcctaccag
agtctgccggacacacgccaggcgtcctggcacgcgcctccctgggcacaggacggctac
ggccagcaccactcctcccacccagctctccacccatcctcaacacattacttaaaccac
ccgccgccccaggcccactctcctcacccgcctcatccatccagcactcctctccagccg
tacccgtctcacagcgctcaactcgcagtgccctcccacgctcctccctcctacatgccg
cagcacccagaatcccccgcacacagccgctacggggacacgagagagaaagtgtacgtc
aacctgtgtaacatcttcccctcggagctggtgagccgggtaatggccaggagcccccat
atcacagacccccagcagctggcagctgctatacttgcagagaaagcccaaacaggctac
tga
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