Anoplopoma fimbria (sablefish): 129111761
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Entry
129111761 CDS
T09102
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129111761
04121 Ubiquitin system [BR:
afb04121
]
129111761
Transcription factors [BR:
afb03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
129111761
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
129111761
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
DUF659
Motif
Other DBs
NCBI-GeneID:
129111761
NCBI-ProteinID:
XP_054479819
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All DBs
Position
22:complement(12912191..12918146)
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AA seq
681 aa
AA seq
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MEGKGSGPSCSGLNLVAHPRAKSKVWKYFGFDTDANGCILHWKRIYCRVCMGQIAYSGNT
SNLSYHLEKYHPVDFSEFVKINTDQMREAFVTAFSKIKTEPSGLQIQQPSQDADSRQSSD
YENRHNDLTKAVINFICEGLYPVSVVEEPTFKTLMSTVDPGYSPPSKSDLAGKLLPQMYC
RTRDMVFSELAGVVSCGVTTDLWQSHTRNRTYISLSMHSVNYTLCRGFSMTNKCLKTFEV
QEDNRAENITRAMYEAFVEWGITHKVSGATTNGSVDIVKACSLLDLWVEMPCLGHTINRA
MDEAFQLPPVNSFLGCCRKLIDHFKEPTLYLLRDKQKQHGLTQCALVTDRARSWLATLAM
LQRLKEQQIAITATLRESSSGHHFSFESHQWALLDGLIEVLQPFKVVANMITSCRYPTIS
MVRPVLHMLLNTTLKAKEGDLKEISTAKELMSKVLSSSYSQNTQLSQDISTFLNIATFLD
PRYKKLPFLSNQERSKVESNIVEEAKAILEKQIAERPCVDDFSLVSEEPPSKKHAPLRES
AGSSTQDNPLAAIFCQSDTDQSQEELHAQVVEELSNYKSQRVLGLNEDPLLWWSSHAPLF
PTLPKVLQKYWCVPATSVPSHRLLSSSGPVVCGKRNRIAPALVDQQVFLYENSRSYYEPE
PCEDDLDNVLERNCGLGQPLE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggagggtaaaggttcaggaccttcatgctctggcctcaatctggtggcacacccacgg
gcaaagagcaaagtgtggaaatactttggctttgacacggacgcgaatggctgcatactg
cactggaaacggatctactgccgcgtgtgtatggggcaaatcgcttattctggaaacacc
tccaatctttcgtaccaccttgagaagtaccaccccgtggacttcagtgaatttgtgaag
atcaacacggatcagatgcgcgaggcgtttgtcacggcgttctccaagataaagaccgag
ccttcaggtctacaaattcagcaaccgtcgcaggacgccgactccaggcagagttcagat
tatgaaaaccgacacaacgatctaacaaaagccgtcatcaacttcatctgtgagggcctg
tacccggtatctgtagtggaagagcctaccttcaagaccttaatgagtaccgtagacccc
gggtactctccgcccagcaaaagtgacctggcaggtaaactgctccctcagatgtactgc
cggacccgggacatggtcttcagtgagcttgctggggttgtgagctgtggcgttaccacc
gacctttggcaaagccatactcggaacaggacgtacatctcactctctatgcattcagtt
aattacactttatgtcgcggcttctccatgaccaacaagtgtctcaaaacgtttgaggtg
caagaggacaaccgagctgagaacatcaccagagccatgtacgaggcgtttgttgagtgg
gggataacgcataaagtcagcggtgccaccaccaacggttcagtggacattgtcaaagca
tgctcgctcctggacctgtgggtggagatgccgtgcctcggacacaccatcaaccgagcg
atggacgaggccttccagctgccgccagtcaacagctttttggggtgttgccgaaaactc
atcgaccatttcaaagaaccgaccctgtacctgctgagggacaaacagaagcagcatggc
ctcactcagtgtgcactcgtcacagacagggccaggtcttggttggccacgttggcaatg
ctccaaagactgaaggagcagcagatcgctataactgctacacttagagagagttccagc
ggccatcacttcagctttgaaagccatcagtgggctttgttggatggcttgattgaagtc
cttcagccgtttaaagtggtggccaacatgatcacctcttgtaggtacccaacgatcagc
atggttcggcccgtgcttcacatgctgttgaacaccaccctcaaggccaaggaaggggac
ctcaaagagatcagcacggccaaagagctcatgtcaaaggtcctctcaagcagctactcc
cagaacacacagctgtcccaagacatttcaacattcctcaacattgctacgtttttggac
cctcggtacaagaagttgccgttcctgtccaatcaggagcgctccaaagttgagagcaac
atcgtagaggaggccaaggcgatcctcgagaagcagattgcagagcgaccgtgcgtagac
gatttctctttggtatctgaagagccaccgagcaagaagcacgctcctctgagggaatcc
gccgggagttctacccaggacaaccctttggccgccatattttgtcagtctgacaccgac
cagagccaggaggagctgcatgcgcaggtggtggaggagctgagcaactacaaatcccag
agagtccttggtctgaatgaagaccctctactctggtggtccagtcacgcacccttgttc
cccaccctccccaaggtgctccagaagtactggtgtgttcctgccaccagtgtgcccagt
caccggctgctgagctcctctgggccggtcgtgtgtgggaagaggaaccgcatagctccg
gcgttggtagatcagcaggtcttcttgtatgagaactccagaagctactatgagcctgaa
ccctgtgaggatgacttggacaatgtgttggagagaaactgtggactgggccagcctctt
gagtga
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