Anoplopoma fimbria (sablefish): 129111770
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Entry
129111770 CDS
T09102
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129111770 (ddx4)
Enzymes [BR:
afb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129111770 (ddx4)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Gene silencing
piRNA pathway
129111770 (ddx4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
CMS1
Motif
Other DBs
NCBI-GeneID:
129111770
NCBI-ProteinID:
XP_054479832
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All DBs
Position
22:complement(12755128..12762918)
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AA seq
647 aa
AA seq
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MDEWEEGTTTSTTALTSHTSSEGTQGGSWNTDGGDFGRGRGGRSRRGGFKSPFSGGDESE
NGNDGDSWNHTAGEGGGFRGRGGGGRGGRSRGFGRLDRSETNGDDDDGVHENGFRGRGGG
GGFRRGGDHGARGGFGGGYRGKDEEIFAHGEARDPEKKDDMDGERPRVTYVPPTLPEDED
SIFAHYEKGINFDKYDDIMVDVSGSNPPQAIMTFDEAALCESLKRNISKSGYVKPTPVQK
HGIPIISAGRDLMACAQTGSGKTAAFLLPILQQLMADGVAASSFSELQEPEAIIVAPTRE
LINQIYLEARKFAFGTCVRPVVVYGGVSTGHQIRDILRGCNVLCGTPGRLLDMIGRGKVG
MDKLRYLVLDEADRMLDMGFEPDMRRLVGSPGMPTKESRQTLMFSATYPEDIQRMAADFL
KTDYLFLAVGVVGGACSDVEQTFIQVTKFSKREQLLDLLKTTGIERTMVFVETKRQADFI
ATYLCQEKVLTTSIHGDREQREREQALADFRSGKCPVLVATSVAARGLDIPDVQHVVNFD
LPNNIDEYVHRIGRTGRCGNTGRAVSFYDPDADSQLSRSLVTVLSKAQQEVPSWLEESAF
SNPGTGGFNPTRKSFASTDSRKGGSFHEKDARSPPAAQTADDEDEWE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtgggaagagggaaccactactagtaccactgcactaaccagtcacacctcc
agtgaaggcacacaaggaggctcctggaacactgatggtggtgactttggaagaggtcgc
ggtgggagaagcagacgaggaggatttaaaagcccgttctcaggtggtgatgagagtgag
aacgggaacgatggagacagctggaaccacacggcaggagaaggaggcggcttcagaggc
agaggaggaggaggaagaggagggcgcagcagaggatttggccggctggaccgcagtgaa
accaacggagacgatgacgatggagttcatgaaaacgggtttagaggaagaggaggagga
ggaggtttcagaagaggtggtgaccatggtgccagaggaggctttggaggaggctaccgt
gggaaggatgaggagatctttgctcatggggaagctcgggatccagaaaagaaggatgac
atggatggtgaacgaccaagagtcacatatgttcccccgaccctccccgaagacgaagac
tccatttttgcccactacgagaaaggcatcaactttgacaagtatgacgacatcatggtg
gacgtcagcgggagtaacccgccgcaggccatcatgacctttgatgaggcagcgctgtgc
gagtccctgaaaagaaacatcagcaagtctggctacgtgaagccgacccccgtgcagaag
catggcatccccatcatctctgctggcagagatctcatggcctgcgcccagactggatca
ggtaaaacggctgcattcctgctccccattctgcagcagctaatggccgacggcgtcgca
gccagctccttcagtgagctgcaggagcctgaagccatcatcgtggccccgaccagggag
ctcatcaaccagatttacctggaggcccggaagtttgcctttgggacatgtgtgcgtcca
gtcgtggtctacggtggcgtcagcactggacaccagataagagacatcttacgggggtgc
aacgtgctgtgtggaaccccaggcagactgttggatatgattggaagaggaaaggtgggg
atggataagctgcggtacctggtgctggatgaggctgaccggatgctggacatgggtttc
gagcctgacatgcgccgcttggtgggctcccctggaatgccgaccaaagagagccggcag
actctgatgttcagcgccacctaccctgaggacatccagaggatggcggctgacttcctc
aagaccgactatttgttcttggctgtgggtgtggtgggcggagcctgcagcgatgtggag
cagacgtttatccaagtcaccaagttctccaaaagggaacagctccttgaccttctcaag
accacaggaattgagcgaaccatggtctttgtggagacgaagagacaggctgatttcatt
gccacttacctgtgccaggagaaggtcctgacgaccagcatccacggggaccgtgagcag
cgggagcgagagcaggctctggcagatttccgctccggcaagtgtccagtcctggtggcg
acctccgtggctgcccgcggcctggacattcccgatgtgcagcacgtggtgaactttgac
ctcccgaacaacatcgacgaatacgtccatcgcatcgggaggacgggccgctgcggaaac
acgggcagggcggtgtctttctacgaccccgacgccgacagccagctgtcccgctccctc
gtcacggtcctgtccaaggcccagcaggaggtgccctcgtggttagaggagtctgcgttc
agcaaccccggaaccggaggcttcaaccccaccaggaagagctttgcttcgacagactcc
aggaagggaggatccttccacgagaaggacgcgaggagcccgccggctgctcagactgcc
gatgacgaagacgaatgggagtag
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