KEGG   Anoplopoma fimbria (sablefish): 129111776
Entry
129111776         CDS       T09102                                 
Symbol
kdm4aa
Name
(RefSeq) lysine-specific demethylase 4A isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:afb03036]
    129111776 (kdm4aa)
Enzymes [BR:afb01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     129111776 (kdm4aa)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     129111776 (kdm4aa)
Chromosome and associated proteins [BR:afb03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    129111776 (kdm4aa)
SSDB
Motif
Pfam: JmjC Tudor_2 zf-HC5HC2H_2 PHD_2 JmjN zf-HC5HC2H Tudor_5 PHD DUF4537 LBR_tudor
Other DBs
NCBI-GeneID: 129111776
NCBI-ProteinID: XP_054479845
LinkDB
Position
3:complement(9937636..9962765)
AA seq 1049 aa
MTTDTPAQSVGSRIMTFTPSKEEFKDFSRYIAYMESQGAHKAGMAKVIPPKGWKPRQTYD
DIDDLVIPAPIQQVVTGQSGLFTQYNIQKKPMTVHEFRKTSNMDKFSNPRYVDFDELERK
FWKNLTFNPPLYGADVSGTLYDPDVTEWNIGRLNTILDTVENESGIKIKGVNTPYLYFGM
WKSAFAWHTEDMDLYSINYLHFGEPKSWYIVPPEHGKRLERLAKGFFPGNAQGCEAFLRH
KMTLISPSILKKYGIPFEKVTQEAGQFVVSFPFGYHAGFNHGFNCAESTNFATQRWIDYG
KQATLCTCRQDMVKISMDVFVRKFQPDRYKLWKAGKDNAPIDHSKPTPEAAGFLKEEDKS
EPPKETPSEAVSEEPSTPVQEDKSPKPQTGTKRQLEAIEASEDIKPEVTVKETETEPKKA
RLSRKQSPTKVKPDKDTVKVKTEPKKDKDTKPQPKSQSRASSKKTSNRQSASKKEKNGVS
AVELCPPEPVERRAAAPCSEEEEPQRGSSCGPAHKLFQRTLSPADVLHVHSYAKGDYGEG
EAPHKEEKNNSEDSDDEMEKDSRHVGKAQVAEEVAGDGEPESDLGQLPGHHPLIKDGMSD
EEALEEAPPVQEGGLEGESWAKPLAHLWQNRPPNLKKERVYNQRMGSKAPYCSICTLFHT
YQQTECASGVDGPVTVAGGRMRTKPLIPEMCFTTTTEEDSECEEHPVTPHLEEDGTSLLI
SCSQCSIRVHTSCYGVDPASVSKEWKCARCKANAMTENCCLCSLRGGALQKANNNKWVHV
LCAVAVLEARFVNITERSPVDLSGIPLQRFKLKCYYCKKRMKKASGCCVQCSHGRCPTAY
HPTCAQAAGVLMQPDEWPFVVHVTCCRHKGPTQIERNKAAMHELTVGQKVICKHKNGRYY
QCDVVQLSKETFYEVNFDDGSFSDNLFPEDIVSRDCAQLGPPPQGDVVQVRWTDGLVYGA
KFVAAHAIHMYLVEFEDGSQLTAKRDDVYSLDEELPKRVKSRLSKASDMRFDGIFEEKEI
IKQSKRQRVINSRYRGDYIEPVIYRAIME
NT seq 3150 nt   +upstreamnt  +downstreamnt
atgactacagacacgccggcccaaagcgtgggctccaggatcatgactttcaccccctcc
aaagaggagttcaaggacttcagccggtacattgcctatatggagtcacaaggagcacac
aaagctgggatggcaaaagttattccacccaaaggctggaaacccagacagacgtatgac
gatatcgatgacctggtgatccctgctcccattcagcaggtggtgaccggtcagtcagga
ctgttcacccagtacaacatccagaagaagcccatgactgtccacgagttccgcaagacc
tccaacatggacaagttcagcaatcccagatacgttgattttgacgagctggagaggaag
ttttggaagaacctgaccttcaaccctcccctttatggggccgatgtcagcgggactctg
tatgatccagatgtgacagagtggaacatcggccgcctcaacaccattctggacaccgtg
gagaacgagagcgggatcaagatcaaaggggtcaacacaccatacctgtatttcgggatg
tggaagagtgcctttgcatggcacacggaggacatggatctgtacagcatcaactacctg
cactttggagagcctaagtcctggtacatcgtcccaccagagcatgggaaaagactggaa
cgacttgccaaaggtttctttccagggaacgctcagggctgcgaggccttcctgcgccac
aagatgactttgatttcaccctcaatcctgaaaaaatatggcataccatttgagaaggtt
actcaggaggccgggcagttcgtcgtgtctttcccatttggttaccatgccggtttcaac
cacgggttcaactgtgccgagtcaaccaactttgccacccagcgatggattgattacggc
aaacaggcgacactgtgtacctgccgtcaggacatggtgaagatctccatggacgtgttc
gtacgcaaatttcagcccgaccgctacaagctgtggaaggcagggaaggacaacgctccc
atcgaccactccaaacccacaccggaggctgctgggtttctgaaagaagaagacaagagc
gagcctccaaaagagactcccagtgaagctgtgtccgaggagcccagcactcctgtccag
gaggacaaaagtccaaagcctcagactgggacgaagcgtcagctcgaagctatagaagcc
tcagaagacatcaaacccgaggtgacggtgaaggagacggagacggagccaaagaaggcc
aggctgtcacgcaagcagtctccaactaaagtcaagccagataaagacacagtgaaagtc
aagacagagcccaagaaggacaaagacaccaagcctcagcctaaatctcagtccagagcc
agcagtaagaagacttcaaacagacaaagcgcgtcaaaaaaagagaagaacggcgtgtca
gcagtagagctgtgtcctcctgagcccgtcgagagacgggcagcggccccctgctccgag
gaggaggagcctcagcggggcagcagctgcggcccggctcacaagctgttccagaggacg
ctgagccctgcggacgtcctgcacgttcacagctacgccaaaggagactacggggaagga
gaggccccacacaaggaggagaagaataatagcgaggacagtgacgacgagatggagaaa
gacagcagacatgttggcaaagcacaggtggcagaggaggtggcaggagacggagagcca
gagagtgatctggggcagctgccaggccaccatccgctcataaaagacggcatgagtgat
gaagaggctctagaggaggcccccccagtgcaggagggtggtctggaaggggagagctgg
gccaaacctctggctcacctgtggcagaacagaccccccaacctgaagaaagagagggtg
tacaaccagcgcatgggatccaaagctccatactgctccatctgcaccctgttccacacc
taccagcagactgaatgtgcgagcggcgtggacggtcccgtcacggtggccggtgggcgg
atgcggaccaagcctctgatcccggagatgtgcttcaccaccaccacggaggaggactcc
gagtgtgaggagcatcccgtcacacctcacctggaggaggacggaaccagcctcctcatc
agctgctctcagtgcagcatccgggttcacaccagctgttacggtgttgatcctgccagc
gtgagcaaggagtggaaatgtgcgcgctgcaaggccaacgccatgaccgagaattgctgt
ttgtgttcgctgagaggtggagcattgcagaaagccaacaacaacaagtgggtacatgtg
ctgtgtgcagtggctgtgctggaggcccgctttgttaacatcactgaaagaagtcctgtg
gatttaagtggaatccctttgcagagatttaaactgaaatgttactactgtaagaagagg
atgaagaaggcgtccggctgctgcgtgcagtgctcccacggccgctgtcccaccgcctac
caccccacctgtgcccaggctgccggagtgctcatgcagcctgacgaatggccctttgtg
gtgcacgtcacctgctgtcgacacaaaggccccactcagattgagcgcaataaagcagcc
atgcacgagctgaccgtgggacagaaggtgatatgcaagcacaagaacggccgctactac
cagtgtgacgtggtgcagctgtccaaagagacgttctacgaggtcaactttgatgatggt
tccttcagtgacaatctcttccccgaagacattgtgagcagagactgtgctcagctcgga
ccaccaccccagggtgacgtggttcaggtgcgatggacggacggcctggtgtatggggcc
aaatttgtggctgcgcatgccatccacatgtacctggtggaattcgaggacgggtcacag
ctaacagccaagagagacgacgtctactctctggatgaagaactccccaagagagtcaaa
tccagactgtctaaagcgtcggacatgagatttgacggcatttttgaagagaaggagatc
atcaagcagtcaaagaggcagagagtgatcaactcacgttacaggggggactacatagaa
cctgtgatttacagagccatcatggagtag

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