Anoplopoma fimbria (sablefish): 129111812
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Entry
129111812 CDS
T09102
Symbol
abcb11b
Name
(RefSeq) bile salt export pump
KO
K05664
ATP-binding cassette, subfamily B (MDR/TAP), member 11
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129111812 (abcb11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afb02000
]
129111812 (abcb11b)
04147 Exosome [BR:
afb04147
]
129111812 (abcb11b)
Transporters [BR:
afb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB11 subgroup
129111812 (abcb11b)
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129111812 (abcb11b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
ABC_ATPase
AAA_29
AAA_15
AAA_21
Rad17
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
129111812
NCBI-ProteinID:
XP_054479902
LinkDB
All DBs
Position
22:complement(8028368..8046193)
Genome browser
AA seq
1365 aa
AA seq
DB search
MPTGSVKLHSIKKLGQENHSYDFSDEEPAGSYKNAATSKNDGKKQGNSDQPAIRVGFFQL
FRFATCNDTLMMVVGSVCAVLHGSAQPLMLLVFGLLTDTFIEYDIELNHLRDDRKECVNN
TIQWKRNYTAAESGPITPWNQSDWSLMNNSTWEMLTPLKNLTCGLLDIEYEMTNFAFYYV
GIGAAVFLLGYFQISLWVTAAARQIQLIRKMYFSKVMRMEIGWFDCTSVGELNTRMSDDI
NKINDAIADQVAIFLQRFTTFVCGFCIGFVKGWKLTLVIVAASPLIGVGAGLMALFVAKL
TGMELQAYAKAGAVADEVLSSIRTVAAFGGETKEVQRYDKNLISAQRWGIRKGLIMGFFT
GYMWLIIFLCYGLAFWYGSSLVVDAGEYTPGTLLQVFFGVLIAAMNLGQASPCLEAFAAG
RGAATIIFETIDREPEIDCLSEAGYKLDRVKGDIEFHNVTFHYPSRPEVKILDKLSVPVT
CGETTAFVGPSGAGKSTAVQLIQRFYDPKEGMVTLDGHDIRGLNIQWLRSLIGIVEQEPV
LFATTIAENIRYGRPGVSTEDIIGAAKQANAYNFIMDLPQKFDTLVGEGGGQMSGGQKQR
IAIARALVRNPRILLLDMATSALDNESEAIVQEALDKVRLGRTTISIAHRLSTIKNADVI
VGFEHGRAVERGKHNELLERKGVYFTLVTLQSQGDKALNEKARQMADSEAEPERLNLSRA
GSYRASLRASIRQRSRSQLSNLIPESSVSIVGELGPRAYSVSQADKSTNAIPEEDEEEPV
EPAPVARILKYNLPEWPYMLFGSFGAAINGGVNPVYSLLFSQILATFSVTDPVVQRKEID
GICLFFVMVGVVSFFTQMLQAYAFSKSGELLTRRLRRLGFHAMLGQEIGWFDDHRNSPGA
LTTRLATDASQVQGATGSQIGMIVNSLTNIGVAVLMSFYFSWKLTMLILCFLPFIALSGG
FQAKMLTGFAKQDKQAMETAGRISGEALNNIRTIAGLGKERIFVDMYDAQLDAPYQAALK
KAKVYGACYGFAQCVVFLTNSASYRFGGYLVRQEGLHFSLVFRVISAIVTSGTALGRASS
YTPDYAKAKISAARFFQLLDRVPKISVYSDKGDKWDNFQGNIEFIDCKFTYPTRPDIQVL
NGLNVSVKPGQTLAFVGSSGCGKSTSVQLLERFYDPDHGRVLIDGHDSTRVSVPFLRSKI
GIVSQEPILFDCSIEENIKYGDNSREIGMNEVISAAKKAQLHEFVMSLPEKYNTNVGAQG
SQLSRGQKQRIAIARAIIRDPKILLLDEATSALDTESEKTVQEALDKAREGRTCIVIAHR
LSTIQNSDIIAVMSRGFLMEKGAHDELMSLKGAYYKLVTTGAPIS
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccggatcagtgaaattgcacagcataaagaaactaggacaggaaaaccacagc
tacgatttttccgatgaagaaccagctggctcctataagaacgcagcaacttccaagaat
gatgggaaaaaacagggaaattcagatcaaccagcgataagagtcggcttctttcagctg
ttccgcttcgccacgtgcaacgatacgctgatgatggtggtgggcagcgtgtgcgccgtg
ctgcacggctcggcccagcccctcatgctgctggtgttcggcctgctcaccgacactttc
atcgagtacgacatcgagctcaaccatctgcgcgacgacaggaaggagtgcgtgaacaac
accatccagtggaagaggaactacacggcggcggaatcgggcccgatcacgccgtggaac
cagtccgactggagcctcatgaacaattcaacgtgggagatgctcacaccgctgaagaac
ttgacgtgtgggctactcgacattgaatatgaaatgaccaattttgccttctattatgtt
ggaattggagcggctgtattcttgctgggatactttcagatctccctgtgggtgacggcc
gccgccaggcagattcaactcatcaggaaaatgtatttcagcaaagtgatgaggatggag
atcggctggttcgactgcacctccgtcggggagctcaacactcgcatgtcagatgatatt
aacaagatcaacgacgccatcgcggatcaagttgccatcttcctgcagcgcttcaccacc
tttgtgtgcggtttctgcattggctttgtgaaaggatggaagttaacgctcgtcatcgtc
gcagcaagtccactgatcggtgtcggagctggtcttatggctctgtttgttgctaagcta
acagggatggagctgcaggcctacgccaaagccggagccgtggcagacgaggtcctctcc
tccatcaggactgtggctgccttcggtggagagacaaaagaagtgcaaaggtacgacaag
aacctgatctcagcgcagcgctggggcatcaggaagggtctgatcatgggcttcttcacc
ggatacatgtggctgatcatctttctgtgctatggtctggccttctggtatggctccagc
ctggtggtggacgctggagagtacacaccaggaacactactgcaggtgttcttcggtgtt
ttgatagcagcaatgaatctgggtcaggcctccccatgtctggaggcgtttgctgcaggc
cgtggagctgctaccatcatcttcgagaccattgatagagagccggagattgattgtcta
tctgaggctggatataagcttgacagggtcaaaggagatattgagtttcacaatgtgacc
ttccactacccctccagacccgaagtcaagatcctggacaagctcagcgttccagtgacg
tgcggggagaccacggccttcgtcggcccgagcggagccgggaagagtactgctgttcag
ctcatccagcgcttctacgaccctaaagagggcatggtgaccctggacggtcatgacatc
agagggctgaacatccaatggctgcgctcgctgattggcattgtggagcaggagcctgtg
ctgtttgccaccaccatcgccgagaatatacgctacggtcgacccggcgtctcaacagag
gacatcatcggcgccgcaaagcaggccaacgcctacaacttcatcatggacctgccgcag
aaattcgacaccttggtgggggagggtggaggtcagatgagcggcggccagaagcagcgg
atcgccattgctcgagcgttggtcaggaatcctcgcatcctgctgctggacatggcgacc
tctgccctcgacaacgagagcgaggctatagttcaagaggctttggataaagtacgtctg
ggtcgcaccaccatctccatcgctcaccggttgtccaccataaagaacgccgacgtgatc
gttggcttcgagcatggccgagccgtggagcggggcaaacacaacgagctgctggagagg
aagggcgtctacttcactctggtcaccctgcagagccagggggacaaggctctgaacgag
aaggctcggcaaatggctgacagtgaggcagagccagagaggctaaatctatccagagcg
ggcagctaccgtgccagtttgagagcctctattcgccagcggtcccgatctcagctgtcc
aatctgatcccggagtcttctgtttccatcgttggagagctcggccccagagcctactcc
gtgtcacaggcggacaaatccacgaatgccatcccagaggaggacgaggaggaaccagtg
gagcccgccccggttgccaggatcctgaagtacaacttacctgagtggccctatatgctt
tttggatcctttggcgcggccatcaatggaggggtcaaccccgtctactctctgctgttc
agtcaaatcctggcgacattctcagtaacagatcccgtggtccagaggaaggagattgat
ggcatctgcctgttctttgtcatggtcggagtggtctctttcttcacccagatgctgcag
gcttacgctttctccaagtctggagagctgctgacgcgcaggttacggcggctcggcttc
cacgccatgctgggccaagagatcggctggtttgatgatcacagaaacagccccggagcg
ctgaccacccgtctggcgactgatgcctcccaagttcaaggagccacgggctcgcagatc
ggcatgatcgtcaactccctgaccaacattggcgtggccgtcctcatgtccttctacttc
agctggaagctcacgatgctcatcctgtgcttcctgccgttcatcgccctgtccggcggc
ttccaggccaagatgctgacggggttcgccaagcaggacaagcaggcgatggagaccgcc
ggacggatttccggcgaggcgctgaacaacatccgcaccattgcaggcctggggaaagag
aggatttttgtggacatgtacgatgcccagctagatgctccgtaccaagcggccctgaag
aaggctaaagtgtacggagcctgctacgggtttgcccagtgcgtcgtcttcttgaccaac
tccgcctcctacaggttcggaggttacttggtgcgacaggaggggctccacttcagcttg
gtgttcagggtcatctctgccatcgtcaccagcggcactgccctcggcagagcctcctct
tacacgccagactacgccaaggcgaagatctcagcggctcgtttcttccagctgctcgac
cgcgtgcctaagatcagcgtctacagcgataagggagataaatgggataacttccaaggg
aacatcgagttcattgactgcaagttcacctaccccaccaggccagacatccaggtcctg
aacgggctgaacgtgtcggtgaagcccggccagacgctggccttcgtgggcagcagcggc
tgcgggaagagcaccagcgtgcagctgctggagaggttctatgatcccgaccacggcaga
gtgctgattgatggccacgactcgacccgcgtcagcgtgcccttcctgcgctccaagatt
ggcatcgtgtcccaggagcccatcttgttcgactgcagcatcgaggagaacatcaagtac
ggcgacaactcgcgggaaatcggcatgaatgaggtcatctcggccgccaagaaggctcag
ctccatgaatttgtcatgtcactccccgagaaatacaacacaaacgtcggtgcccagggt
tcccagttgtcccgcggtcagaagcagcgcatcgccatcgccagggcaatcatacgcgac
cccaagatcctgctcctggacgaggccacctccgccctggacaccgagagcgagaagacc
gtgcaagaggccctggacaaagccagagagggccggacgtgcatcgtcatcgcccaccgc
ctgtccaccattcagaactcggacatcatcgccgtcatgtccaggggctttttgatggag
aagggagcgcacgacgagctcatgtcactgaagggagcctactacaagctggttaccacg
ggagcaccaatcagctaa
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