Anoplopoma fimbria (sablefish): 129111826
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Entry
129111826 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: protein unc-13 homolog A-like
KO
K15293
protein unc-13 A/B/C
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129111826
Membrane trafficking [BR:
afb04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
129111826
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MUN
C2
C1_1
Exo70_C
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
129111826
NCBI-ProteinID:
XP_054479930
LinkDB
All DBs
Position
3:24512595..24542635
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AA seq
1882 aa
AA seq
DB search
MSLLCVGVKKAKLDGPQEKFNTYVTLKVQNVKSTTIAVRGNLPSWEQDFMFEINRLDLGL
TVEVWNKGLIWDTMVGTVWIPLHSIRQSNEEGPGEWLTLDSQVIMTDNEICGTKEPTLHL
VLLDTRFELPLDIPEDEARYWAKKLEQLNAMRDQDYSYQEEQERPLRVPGTQCCNWSLWG
DQPNEDPDSAVDDRDSDYRSETSNSIPPPYYSTSQPNASVHQYPISHQHRSSRSLTYTST
GNSHDLDYQHQRTVSPSGSYASSAELSRCSSQLSEEDYGVEYGERDPYDENDSYHSCHSS
VSYSKGSPDWDPDETQGAYSDEGGYSKDGGEEAALYEEDDGGLYEGEEEGLYEDEEMMYD
EEDLYNLEGTLSEDMEPPFTPTPTSTAPXTLDVPSSRPPLEKQPSLHQQQPPTQPPNQTA
NQSHPPGVAPSAQPPSGQPTAQPPKQPQPQTQPQPQPQPQPQPAPSATSFFSMAKPLTAA
VTGLASTFLSSVPTGQPAQSHPPASAVSQQHPSAAATVVPPSNPVNVANSASQPPSTAMG
PSSQQTQSSGQPQSHLNGPATTQSAAPEDQALQLEEEPWLEEEMMMEKEARTPPAQPEET
FSMEEKEEHFEESRPPTPVEEEEMLPESPPVIEEPKEPVDPAVRAKENWLRLYNKVLDQL
REARGETSSSLWFGKGGVGGALYSIDSMPDLRKRKAIPLVRDLAMSLVQSSRKAGITSAM
ASTTLGNEELKSHVYKKTLQALIYPISSTTPHNFEVWTATTPTYCYECEGLLWGIARQGM
RCSECGVKCHDKCQDLLNADCLQRAAEKSSKHGAEDRTQNIIMVLKDRMKIRERNKPEIF
ELILEVFALDKTTHGTQMKQIKQSVLDGTSKWSAKISITVVCAQGLQAKDKTGSSDPYVT
VQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVWDEDDDIKSRVKQRFKRESD
DFLGQTIIEVRTLSGEMDVWYNLDKRTDKSAVSGAIRMHISVEIKGEETVAPYHVQYTCL
HEHLFQYTTEEQNGGVVKIPDAKGDDAWKVYFEETAQEIVDEFAMRYGVESIYQAMTHFA
CLSSKYMCPGVPAVMSTLLANINAYYAHTTQSSNNVSASDRFAASNFGKERFVKLLDQLH
NSLRIDLSMYRNNFPASSPERLQDLKSTVDLLTSITFFRMKVQELQSPPRASQVVKDCVK
ACLNSTYEYIFNNCHDLYNREYQTDPSKAVPPDEQGPSTKNLDFWSKLITLIVSIIEEDK
NSYTHCLNQFPQELNVGKISAEVMWNMFAQDMRYAMEEHEKNRLCKSADYMNLHFKVKWL
YNEYCKELPTFQKHVPEYPAWFEPFVVMWLDENEEVSRDFLHGALERDKKDGFQVTSEHA
LFSCSVVDVFSQLNQSFEIIRKLECPDPQIVGNYMKRFAKTIGNVLLSYADIIEKDFPNH
VKKEKVPCIIINNIQQLRVQLEKMFEAMGGKDLNLEASDFLKELQNKLNSVMDDLSRIFA
VSFQPQIEDNVRQMGDILAQVKGQTVPANGSVVQEADNVLQPIMDFLDSNLSLFAKICEK
TVLKRVLKELWKLVMNTMEKTIVLPTLTDQTGTQMIFNAAKELGQLSKLKEHMGREEAKA
LSPKQCAVIELALDTIKQYFHAGGVGLKKTFLEKSPDLQSLRYALSLYTQATDKLIRKFV
LSQSAQVHGGKGVRCTANEDTPPEKASGVDAVGEVVMCVDILPQPNGEHKISVKVVAAND
LKWKAQGFRPFVEVCIIGPHLSDKKRKFATKSKNNTWSPKFSESFQFSLGTEVGPESYEL
QVCVKDYCFAREDRTVGTAVVQVKDIASKGSVTCWMPLGRRVHMDETGLTVLRILSQRNN
DDVAKEFVKLKSDQRSVEEGRS
NT seq
5649 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgctgtgtgtgggagttaagaaagccaagctggatggaccccaagagaaattc
aacacttatgtgactctaaaggtacaaaatgtgaagagcacaaccatcgctgtcaggggc
aacttgcccagctgggagcaggacttcatgtttgaaattaaccgcttggacctgggtctg
acagtagaggtgtggaacaaagggttgatctgggacaccatggttggcactgtgtggatt
cctctgcatagtatccgacagtcaaatgaggaaggtccgggggagtggctcacactggac
tctcaggtcatcatgactgataatgagatctgtggcaccaaagagcccactctccacctg
gtgctgctcgacacacgctttgaactgcccctagatatcccagaggatgaggcacgatac
tgggctaaaaaactggagcagctcaatgccatgagggaccaagattattcttaccaggag
gagcaggaacgccctctacgtgtaccaggaacccagtgctgtaactggagtctatgggga
gaccaaccgaatgaagacccagacagtgctgtggacgacagggacagcgactatcgcagt
gaaaccagtaacagcatcccccctccctactacagcacttcccagcccaatgcctctgtc
caccagtatcccatcagccaccagcaccgcagctccagaagcttgacttacacgagcact
ggcaacagccatgacctcgactaccaacatcagagaactgtcagtccgtcggggagctat
gcatcttctgcagagctgagtcggtgcagcagtcagctgagcgaggaggactatggcgtt
gagtacggagagagggacccttacgacgagaacgactcttaccactcctgccactcctcg
gttagctacagtaaaggctctccagactgggaccctgatgagacccagggggcgtacagc
gatgagggcggctacagcaaagacggaggagaggaggcggctctgtatgaggaggatgac
ggaggactgtatgagggagaagaggagggcctctatgaggatgaggagatgatgtatgat
gaggaggatttgtacaacttggaggggaccctcagtgaggacatggagcctccatttacc
cccaccccaacgtcaacagcccccncaactctggatgtacccagctccagacctcctctg
gagaaacagccatctttacaccaacagcagccccctactcaaccccccaaccaaacagcc
aaccagtctcatccacctggtgtggccccatcagcacagcccccctctggtcaaccaaca
gcccaaccacctaaacagccccagccacaaacacagcctcagccacagccacagccacag
ccacagccagccccatctgccacttccttcttctcaatggccaaacctctaactgctgca
gtcacaggcttggcatctaccttcttgtcttctgttcccaccgggcagcccgcccagtct
caccctccagcctcagccgtatctcaacaacacccgtctgctgcagccactgttgtccct
ccatccaacccagtcaacgtggcaaactcggcctcccagcccccctcgactgccatgggc
ccttcctcccaacagacccaatcctctgggcagcctcaatcccatctcaatggtcctgcc
accacacagtcagctgcccctgaggaccaggctctccagctggaggaagagccatggtta
gaggaggaaatgatgatggaaaaagaggccaggacaccccctgctcagccagaggagacg
ttctccatggaggagaaagaggagcattttgaagagagcaggccgccgacaccagtagag
gaagaagagatgctgcctgaaagtcctcctgtcatagaggagcccaaagagccagtggat
ccagctgtcagagccaaagagaactggctaaggctctacaataaagtcttagatcagctt
cgggaggctcgaggagagacctccagctcgctgtggtttggtaaaggaggagtgggaggt
gcactctacagtattgacagcatgcctgacctacgcaagaggaaagccattcctcttgtc
agagatctggcaatgtctctagtgcagagctctcgtaaggctggaatcacctccgccatg
gcttccaccactctcggcaatgaagagctaaaaagccatgtttataaaaagaccctgcag
gctctgatctaccccatctcctccactactccacacaactttgaggtgtggacagcgacc
acccccacctactgctacgaatgcgaggggctgctttggggtatcgcccgacaaggcatg
cgctgctctgagtgcggcgtcaaatgccacgataagtgccaagatctgctgaatgccgac
tgtctgcagagagctgcagaaaagagctccaagcacggagcggaggaccgaacccagaac
atcatcatggtcctgaaggaccgcatgaaaatccgagagaggaacaaaccagaaatcttt
gagctaatcctggaagtgttcgcccttgacaaaacaacacatggcacgcaaatgaaacag
atcaagcagagcgtgcttgatgggacctctaaatggtcagcgaagatcagcatcaccgtg
gtttgtgctcagggcctgcaggctaaagacaaaacaggctccagtgacccttatgtaacc
gttcaagtcggaaagaccaagaagagaactaagaccatctatgggaacctcaaccctgtc
tgggaagaaaactttcattttgaatgccacaactcgtctgaccgtatcaaggttcgcgtg
tgggacgaggatgacgacatcaaatcacgtgtgaaacagaggtttaaacgtgagagtgat
gacttcctgggccagaccatcatcgaagtccggactctgagtggggagatggatgtttgg
tacaacctggacaagagaacggataagtctgctgtgtcaggagccatccggatgcacatc
agtgtggagatcaaaggagaggagacggttgctccttaccatgtccagtacacctgtcta
catgagcatctgtttcagtacaccactgaggagcagaatggcggcgtggtaaagatccct
gatgccaaaggagatgatgcctggaaggtgtattttgaggaaactgctcaagagatagtg
gatgagttcgccatgagatatggagtagagtctatctaccaggccatgacccactttgcc
tgcttgtcatctaagtacatgtgcccaggagtgccggctgtgatgagcaccctgcttgcc
aacatcaacgcttactacgcccacaccacccagtcctccaacaatgtttctgcctcggac
agatttgctgcatcaaactttggcaaggagaggtttgtcaaactgttggatcagctgcac
aactcgctgaggatcgacctgtccatgtaccggaataatttccctgccagcagtcctgaa
agactacaagacctcaagtctacagttgatctcttgacaagcatcacattctttaggatg
aaggttcaggagttgcagagtccccccagggcgagccaggtggtgaaggactgcgtgaaa
gcctgtctcaactccacctacgagtacattttcaacaactgccacgacctctacaacagg
gaatatcagacagacccttcaaaggcagtccctccagatgagcagggccccagcaccaag
aacctggacttctggtccaaacttatcaccctcatcgtctccatcatagaggaggacaaa
aactcctacactcactgccttaatcagtttccgcaggaactgaacgtgggcaagatcagc
gccgaagtcatgtggaacatgtttgcacaagatatgagatacgccatggaggagcatgag
aagaaccgcctgtgtaaaagcgcagattatatgaacttgcacttcaaggtgaagtggctc
tacaatgagtactgcaaggagctgcccactttccagaagcacgtacctgaatatccagcc
tggtttgaaccatttgtcgtcatgtggttggacgagaatgaagaagtgtccagagatttc
ctgcatggagccttggagagggacaaaaaagacgggttccaggttacatcagagcatgca
ttgttctcctgctcagtggtagacgtgttctctcagctcaatcagagttttgaaatcatc
cgcaaactggagtgtcccgacccccagatcgttggcaactacatgaagagatttgccaag
accattggcaatgtcctgctgtcttacgctgacatcattgaaaaggactttccaaatcat
gtcaagaaggagaaagtgccatgtatcatcatcaataacatccagcagctcagagttcag
ttggagaagatgtttgaggccatgggaggcaaagatctcaatctggaggctagtgacttc
ctcaaggagctgcagaacaaactcaacagcgttatggacgatcttagccgcatctttgct
gtcagtttccagccacagatcgaggacaacgtgaggcaaatgggtgacatcctagcccag
gttaaaggacagaccgtccccgccaacggcagcgtggtacaggaggccgacaacgtcctg
cagcccataatggacttcctggacagcaacctgtcgttgtttgctaagatctgtgagaag
actgtccttaagagagtgctgaaggagctgtggaaactagtgatgaatacaatggaaaaa
acaattgtgcttccaacgctcactgaccagacgggcactcagatgatcttcaacgctgct
aaggagttgggccagctctccaagctcaaggagcacatgggccgagaggaggccaaagct
ctgagtcctaaacagtgtgcagtaatagagctggcactggacactattaagcaatacttc
catgccggtggtgtgggcctgaagaagacgttcttggaaaagagtccagacctgcagtct
ctgcgctacgccttgtctctgtacacccaggccacagacaagctcatcaggaagtttgtc
ctctcacagagcgctcaggtccacggagggaaaggggtcaggtgcacggcaaacgaagac
acaccgccagagaaagcttctggagtggatgcagttggcgaggtggtcatgtgcgtggac
attttaccccaacctaatggagagcacaagatcagtgtcaaagtggtggctgctaatgac
ctgaaatggaaggctcagggcttcaggcccttcgtggaggtctgcatcatcggcccgcac
ctcagcgacaagaagaggaaatttgccaccaagtccaagaacaacacctggtcaccaaag
ttcagtgagagcttccagttctccttgggcactgaggttggtccagagagctacgagctg
caggtgtgtgtcaaggactactgcttcgccagagaggaccgcactgtgggcacggccgtg
gtgcaggtgaaggacatagccagcaagggcagcgtcacctgctggatgccgctgggcaga
cgtgtccacatggacgagacgggcctgacggtgctgcgcatcctctctcagcgcaacaac
gacgacgtggcgaaagagttcgtcaagctcaaatcggaccagcgctcggttgaagagggc
cgtagttga
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