Anoplopoma fimbria (sablefish): 129111848
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Entry
129111848 CDS
T09102
Name
(RefSeq) SLIT and NTRK-like protein 5
KO
K25836
SLIT and NTRK-like protein 5
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129111848
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
LRRCT_2
LRRNT
Hepsin-SRCR
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
129111848
NCBI-ProteinID:
XP_054479953
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Position
22:10613469..10617073
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AA seq
875 aa
AA seq
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MHIWILKIILLIASSLRLVEMYDNYGEICRNLCTCEEKEGILTVSCENRGIIRLTEISPV
HFSVYHLLLTGNLLKKLSVNDFINYTGVTILHLGNNDISEIESGAFNGLQGLKRLHLNNN
KIEFMRDDTFAGLESLEYLQIDYNYITNIEPNALSKLHQLTVMILNDNMLSALPMNIFRN
VPLTHLDLRGNRLKMFPYIGLLEHMDKVVELQLEENPWNCSCELIALKAWLESIAYTALV
GEVVCETPFRLHGRDLDEVSKQELCPRRPMEDSVRPAPSNITNGYYQTTPAAVTASATSS
AVFRSSSRPTKGTRQFNRTRLKPTSRIPGGNHYNYGPIIAFQTKSPVPLDCPTACTCNLQ
ISEIGLNVNCQERKIESISDLKPKPYNPKKMYLTGNYIPVVRRSDFVDAVGLDLLHLGNN
RISLIHDRAFGDLTNLRRLYLNGNLMDRLTGEMFFGLQNLQYLYLEYNKIKEVDAGTFRY
LPNLQLLFLNKNLLKTLPVGIFSSLSLSRLNLRNNHFQNLPVSGVLDQLKLLVQIDLFEN
PWDCSCDIVGMKIWLEQLSAGTVVSEIVCETPRRHTGVDVRSIQSELLCPDYSDANVSPT
PPTEEPMDDTVVTTGAPQKFNTPSSTVPLSVLILSLLLVFIMSVFVAAGLFVVVMKKRKK
SQSDRTSTNNSDVSSFNLQYSLYSNRSGPKVKAPAGHVYEYIPHPMGHMCKNPIYRSREG
NTVEDYRNLHELKVTYRSTPDDERDSSTMRSPTYSVSTIEPRENPSPVPDADHFFRGILD
HDKQPPHPSIPSIPAGANLEYKYTGPVSYTYNPNFDVRRQFLRPERIRETVLFGTAPSTV
YVEPNRNEYLELKAKLQSEPDYLEVLEKQTTFSQF
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcatatctggatcctcaaaatcatccttctgattgcatcatctctgaggctggtcgag
atgtatgacaattatggggagatctgtcggaacctgtgtacgtgcgaggagaaagaaggg
atcctgacggtgagctgcgagaaccggggcatcatcagactgacggagatcagccctgtc
cacttctccgtgtaccacctcctgctgacagggaacctcctgaagaagctgtcagtcaat
gatttcatcaattacacaggagtgaccatcctgcacttggggaacaatgatatctctgag
atagagtcaggtgccttcaatggactccagggattaaaaaggttgcacctgaataacaac
aagatcgagtttatgagggacgacacctttgccggattggaaagtttggaataccttcag
attgattataattacatcaccaatatagagcccaatgccttgagcaaactacaccaactg
acagtgatgattttgaacgacaacatgctctctgccctgcccatgaatatcttccggaat
gttccccttacgcacttggacttgagggggaaccggttaaaaatgttcccctacatcggc
ctcctggagcacatggacaaagtcgtggaattacaactggaggagaacccctggaattgc
tcttgcgagctgattgctctgaaggcttggctggagagtatagcctacacggctctggtg
ggggaagtggtttgcgagaccccgttcaggctccacggtagggacctggatgaggtgtcc
aagcaggagctctgcccaagaagacccatggaagactctgtcaggcctgcaccctctaat
atcaccaatggatattaccagacaacacctgctgctgtcaccgcctccgccacctcctcg
gctgtttttaggtcatcctctaggccgaccaagggcacacggcaatttaacagaactagg
ttaaagcccacttcccgaataccaggcggtaaccattacaattatggccccatcattgct
tttcagaccaaatctcctgtgcctttggactgtcccactgcctgcacgtgcaacctgcag
atatctgagattgggctgaatgtcaactgccaagagagaaagattgaaagcatttctgat
ctaaaacccaagccatacaatcctaaaaaaatgtatctcactggaaattacatccctgtg
gtacggagatcagatttcgtggatgcagttggattggatttgcttcacctgggaaacaac
aggataagtctgatccacgaccgggcttttggggatttaaccaacctgcgtaggctgtat
ttgaatggtaatctcatggacaggcttacaggagagatgttttttggtttgcagaacttg
cagtatctttatttagagtacaacaaaatcaaggaggtcgatgcgggcactttccgctac
ctccctaatctccagctgctcttcctaaacaaaaacctcctgaaaaccttaccggtgggt
atcttttccagtctctccctgtctagacttaatctgcgcaacaaccatttccaaaacctt
cctgtgagtggtgttttagatcagctgaagctgctggtgcagatagatctgtttgaaaac
ccctgggactgctcctgcgacatagtggggatgaagatatggctggagcagctcagcgca
ggcaccgtggtcagtgagattgtttgcgaaactccacggcgccacacaggagtggacgta
cgctccatccagtcggaactgctctgcccggactactctgacgctaacgtctccccgaca
ccccctacggaggagcccatggacgacacagtcgtcaccacgggcgcgcctcagaagttc
aacacccccagcagcaccgtccccctctctgtcctcatcctcagcctcctgctcgtcttc
atcatgtccgtcttcgtggcggcggggctgtttgttgttgtgatgaaaaagcgcaaaaag
tcccagagtgaccgcactagcaccaacaattcggacgtcagctcttttaacttgcagtac
agcctctacagcaaccgctccggcccaaaagtgaaggccccagccggccacgtctatgag
tatatcccccaccccatgggccatatgtgcaaaaaccccatttacaggtcacgtgaagga
aacacagtggaggattaccgcaacctccatgagctcaaggtcacgtacaggagtacccca
gatgatgagagggatagcagtacgatgaggagccctacgtacagtgttagcaccatcgag
ccacgtgagaacccctcccctgtcccggatgcagaccatttcttcagaggcatcctcgat
cacgacaagcagcccccccatccttcaatcccgtccatcccagcaggcgccaatttagag
tacaagtacacagggcctgtgtcgtacacgtacaacccaaattttgatgtcagacgtcag
ttcttgcgcccggagaggataagagaaacagtgctctttggcacggcacccagtactgtt
tatgttgagcccaacagaaatgagtatttggagctaaaagctaaactgcagtctgagccc
gattacctcgaagttctcgagaaacagaccacctttagccagttctga
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