Anoplopoma fimbria (sablefish): 129111881
Help
Entry
129111881 CDS
T09102
Symbol
zswim2
Name
(RefSeq) E3 ubiquitin-protein ligase ZSWIM2
KO
K15716
E3 ubiquitin-protein ligase ZSWIM2 [EC:
2.3.2.27
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129111881 (zswim2)
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129111881 (zswim2)
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129111881 (zswim2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
SWIM
zf-rbx1
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
129111881
NCBI-ProteinID:
XP_054480006
LinkDB
All DBs
Position
22:complement(2831245..2835658)
Genome browser
AA seq
594 aa
AA seq
DB search
MFRKTTCRNTVSDAVSLHQDQALNTTIFLLKSFGPTGFLLREEGEVRNVKVCLGDPHTCT
CPVFTKDQEPCKHICWVLLRKFRLPREHEYSFQHGLVERQILELLHGLHQTKDHRTENEP
SVASGTTSQPVTGQEAGSVCRKVIQAQDVCPICQEVLLEKKQPVSYCRFGCGNNVHISCM
KVWADHQRLSDREETVKCPLCREDFSSLKLLQEQVKNAAKLSTASEKEKPDRHLGVLCHS
CRVCPVTGKCFKCTVCSYLYLCEDCSKMGCHPQHPFASRAKRREKWHLVPKGLNDEPREA
TSHSANDGIVPGAADPLPGSVLDCLPTVRVRPGSRLLDVGQQCRICLLDFSLGQRVRTLP
CHHKFHADCVDGILRKSNSCPLDGYVIYNPSTWRTSETKTSPNTFSSRSSDCSTRPENNL
KDLFIPGVALRDRNSKVTPSHGSLNLEVLTGSSVTLHNPPKLIKDRFQGIAADTVTEEGK
GDLQIKQILLNPESSSSFDHLSISGLCVCPSKNPASPNKCAAVTKIREQPELNLFVGLCR
PESDRSATVAFPARRARLKPKRTDTAAITEPNNGLISELRMTGVLINTQQQKKT
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgttcaggaaaactacctgcaggaacacagtcagtgatgcagtgagtctgcaccaagac
caggccctcaacaccactatattcctcctgaagtccttcggccctacaggatttctactg
agagaggagggagaggtcaggaacgtcaaggtgtgcttgggtgacccacatacgtgcact
tgccctgtgttcaccaaggatcaggagccctgcaaacacatctgctgggttttactgcgg
aaattcagactacccagagaacatgaatattcgtttcagcatggacttgttgagagacag
atcttggagttgctccatggtttacaccaaaccaaagaccaccggacggaaaatgagccc
tctgttgcttctgggactacgagccaaccggtcactggccaggaggctggaagtgtctgc
cggaaagtgatccaagcccaggatgtgtgtcctatctgtcaagaagtgctgctggagaaa
aaacagcctgtgtcttactgcaggttcggttgtggcaataatgtccacatctcttgcatg
aaggtgtgggcggatcaccagagactgtcagacagggaagaaacagtgaagtgccctctg
tgcagggaggacttcagctccttgaagttactccaggagcaggtgaaaaacgcagcaaag
ctctccactgcctctgagaaagagaagccagaccgacacctgggggttctttgtcacagc
tgccgggtctgccctgtcactggcaaatgtttcaaatgcacagtctgcagttacttatat
ctgtgtgaggactgctcaaagatgggctgccacccacagcatccatttgcttcacgggca
aaaaggagagagaagtggcatcttgttcccaaaggcctgaatgatgaaccaagggaggcg
acctctcactcagctaatgacggcatcgtccctggagctgcagaccctctaccaggaagt
gtgttggactgtctccctacggtcagagtgagaccggggtctcgcctcttggatgtggga
cagcagtgtcggatctgtctgctggattttagcctgggccaacgtgtccggactctgccc
tgccatcacaagttccacgctgactgtgtggacgggatcctgcggaagtcgaactcctgc
cccttggatggatatgtcatttataacccctcgacatggagaaccagtgaaacaaagacc
tctcctaacacgttctcctcccgttccagtgactgttccacacgaccagaaaataacttg
aaggacctgtttattccaggggtggcactgcgagacaggaactctaaagtcactccctca
cacggttctcttaatttagaggtgctcactggctcttcagtaactttacacaacccacca
aagttaataaaggacaggtttcagggcatagctgcagacactgtcactgaagaggggaaa
ggagatttgcagataaaacaaattcttcttaatcctgaaagcagctcctcttttgatcat
ctaagtatatctggcttatgtgtatgtccctcaaaaaaccctgcttcacctaacaagtgt
gctgcagtgacaaaaatcagagagcaaccagaactgaacctttttgtaggtttgtgtaga
cctgagtcagaccgctcagctactgtggcctttcctgccaggcgagctagacttaaaccc
aaaaggaccgacacggcagccattacagagccgaacaatggactcatttcagagctcaga
atgaccggagtcttgataaacacacagcaacaaaagaagacatag
DBGET
integrated database retrieval system
