Anoplopoma fimbria (sablefish): 129111900
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Entry
129111900 CDS
T09102
Name
(RefSeq) double-stranded RNA-specific editase 1-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afb03041
]
129111900
Spliceosome [BR:
afb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129111900
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Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
129111900
NCBI-ProteinID:
XP_054480028
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All DBs
Position
22:complement(12286444..12317164)
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AA seq
752 aa
AA seq
DB search
MALLLDGSRTAAAAYCCLIRRRCKRRRKKRSERKGRLGDWLPRNQQRLLTIEGGEVKSMS
SCSTDVKENRNLDNLFSKEGVAAEAAQLPNGSAGGGRKRPLEEGNNGHAHSKYKPKKRKK
IPGPILPKNALMQLNEIKPGLQYKLLSQTGPVHAPIFVMTVEVNGQLFEGSGPTKKKAKL
NAAEKALRSFVQFPNASEAHMAMGRTLSVHTDFTSDQADFPDMLFNAFETSTPADDPFYL
ASNSNGSFSSLGIEYPLLPSPVPNLVQAPLPPVPSTFISPTSGKNPVMILNELRPGLKYD
FVSESGESHAKNFVMSVSVDAQNFQGSGRNKKLAKARAAQAALSALFNMQLDQAPSKQPI
PREGLQLHLPQVLADAVSRLVVDKFSELTDNFTSPHSRRKVLAGVVMTTGADVKEAQVIC
VSTGTKCINGEYMSDRGLALNDCHAEIVARRSLIRYLYSQLEPFLSNHEEEQQTSIFTRC
DNKQGFRLKENVQFHLYISTSPCGDARIFSPHEAGMEDHGDRHPNRKARGQLRTKIESGE
GTIPVRSTNTIQTWDGVLQGERLLTMSCSDKIARWNVVGFQGSLMSYFTEAIYFSSIILG
SLYHADHLSRAMYQRITEIEDLPQSFSLNKPLLSGISNAEARQPGKAPNFSVNWTVGDQG
LEVINATTGKDDLGRPSRLCKHALYGRWMRLHCKLSSNLRIKTVRPSIYHDAKQAAVEYH
GAKQALFRAFHKAGLGAWVKKPIEQDQFALAT
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggctctgctgctggacggctctcgcacggcggcggccgcctactgctgcctgatccgc
cgcaggtgcaagaggaggaggaagaaacgctccgagcgcaaaggtcgattgggagattgg
ctaccccgaaaccaacagaggctgctcaccatagaggggggcgaagtaaaaagcatgagt
tcatgcagcacagatgttaaggaaaatcggaacttggacaacctcttctccaaagagggg
gttgcggctgaggctgctcaactccccaatgggagtgctgggggtgggaggaagcgtccc
ttagaggagggcaataatgggcatgcacattccaagtacaagcccaagaagcgtaagaaa
atccctgggcccattctgcctaagaatgccctaatgcagctgaatgagatcaagccaggg
ctgcagtacaaactgctctctcagactgggcccgtccatgcacccatcttcgtgatgact
gtggaggtcaatgggcagctctttgagggttctggtcctaccaagaaaaaggcaaagctg
aacgcggcagagaaggccctgcgctccttcgtccagttccccaacgcgtctgaagcccac
atggccatgggccggactctgtctgttcacacggacttcacctcagaccaggctgacttt
ccagacatgctctttaatgccttcgagacatccactcctgcagatgacccgttttacctc
gcatccaacagtaatggttccttcagctcattgggaatagagtacccgttgctaccctcc
cctgtcccgaacctggtccaggcccccttacctccggtcccctccaccttcatctcccct
acaagcggcaagaacccggtcatgatcctcaatgagttacggccgggcctcaagtatgac
tttgtgtcagagagcggggagagccacgccaagaactttgtaatgtcagtgtcagtcgat
gctcagaatttccagggttctgggcggaacaagaagctggccaaggcccgggctgcccag
gctgctctctctgctctgtttaacatgcagctggatcaggctccatcaaaacagcctata
cccagagaaggactgcagcttcatctgccacaggtcctggcggatgccgtctctcgccta
gtcgtcgacaagttcagcgaactgacggacaacttcacgtctccacactccaggcggaaa
gtattggcaggtgtcgtcatgacaacgggtgcagatgtgaaggaggctcaggtcatctgc
gtgtccacaggaacaaagtgcatcaatggtgaatacatgagtgatagaggtttggccctc
aatgattgccatgctgagattgtggctcgccgctcgctcatcaggtacctgtactcccag
ctggagcctttcctcagtaaccatgaagaggagcagcagacatccatatttaccaggtgt
gacaacaaacaaggcttcagactgaaggaaaatgtccagttccacctgtacatcagcacc
tccccctgtggagacgcccgcatcttctcgcctcatgaagctggaatggaggatcatggg
gatagacacccaaacagaaaggcccgtgggcagctccgcactaaaattgagtctggcgaa
ggaaccatcccagtacgctccactaacaccattcagacgtgggacggggttcttcagggt
gagaggctgctcaccatgtcctgcagtgacaagatagccaggtggaacgtagttggattc
caaggttctctgatgagctacttcactgaggccatctacttctccagcatcattctgggc
agcctgtaccatgctgaccacctctccagagccatgtaccagaggattaccgagatcgag
gacctgccacagtccttcagcttgaacaaaccactgctcagcggaataagcaacgcagag
gctcgtcagccaggaaaagcacccaacttcagtgtgaactggacggtgggagaccaaggc
ttagaggtgatcaacgccaccacagggaaagatgatctgggtcgaccctccaggctctgc
aaacacgccctctacggccgctggatgcgcctgcactgcaagctgtcctcgaacctgcgg
atcaaaacagtgaggcccagcatctaccacgacgccaagcaggcagcggtggagtaccac
ggcgccaagcaggcgctcttcagagccttccacaaagccggactgggcgcctgggtgaag
aaacctatagagcaggaccagtttgcactcgccacctga
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