Anoplopoma fimbria (sablefish): 129111926
Help
Entry
129111926 CDS
T09102
Name
(RefSeq) cadherin-2-like
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129111926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129111926
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afb04515
]
129111926
04090 CD molecules [BR:
afb04090
]
129111926
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
129111926
Cell adhesion molecules [BR:
afb04515
]
Cadherins
Major cadherins
129111926
CD molecules [BR:
afb04090
]
Proteins
129111926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_3
Stevor
DUF2304
CD34_antigen
DUF4381
DUF5385
Motif
Other DBs
NCBI-GeneID:
129111926
NCBI-ProteinID:
XP_054480066
LinkDB
All DBs
Position
3:complement(10634143..10723776)
Genome browser
AA seq
918 aa
AA seq
DB search
MHLLEIWMLMAALQLVPLGQGAEPSPSSEQGSVPCTRGFTQEEYVIEADRELAKGQAVFN
VSFMDCGRGKVWFQVDNSSDFRVSEDGAIHTLRRLSLVGSGKVVEVVYARDPESKQVWKT
RVHLRVHPNGHSAGPEQVRPSDATQTRRVPEILFPWRSVVVRGDGSLRRVKRDWVIPPIN
VPENSRGQFPEDLVRIRSDRDKNRLLRYSVTGPGADQPPTSIFIINPISGQLSVTKPLDR
EHISNFHLRAHAVDLNGNQVENPIDIVINVIDQNDNRPEFTHTIFNGSVPEGSKPGSFVM
TVTSVDKDDPKTANGMLRYKILSQNPQSPSTNMFTINNKTGDIITVAAGLDREKVTQYTL
IIQATDMEGNPTYGLSNTATTIIRITDVNDNPPEFTTDTFFGEVHENRVNVIVANLTVTD
KDQPHTSAWSAVYRIIAGDPNGRFSIPTDHTTNEGLLTVVKPIDFELSRSFMLTVEAENE
VPLARGIHLPRQSTATVSVRILDVNESPEFSPNPKSIKLEEGLHAGSLLTTFTAQDPDRF
LRQTVRYSKMYDPANWLEIDPVNGRISTIAILDRESPYVKNNLYNVTFMASDNGIPPASG
TGTLQMFLLDINDNAPHVFPPEVEMCEKPYPNAINITASDPDLTHNAGPFAFELANRPLD
VRRNWTLNRINGEYAQLRLRIGSLASGIYEVPIVITDSGNLPMSNTSFLRVKVCQCDNHG
DCVDMERIIAAGLGTGAIIAILICIIILLVLVLLFVMWMKRRDKERQAKQLLIDPEDDVR
DNILKYDEEGGGEEDQDYDLSQLQQPDALEPECVKVGIRRLDERPLHHDHQYPIRSAAPH
PGDIGDFIHEGLKAADNDPTAPPYDSLLVFDYEGSGSDAGSLSSLHSSSSCGDQDYDYLG
DWGPRFRKLADLYGGGDD
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttttggagatttggatgctgatggcggctctgcagctcgttcctctgggccaa
ggggccgagccatcgccgtccagcgagcaggggtcggtaccgtgcacaaggggcttcact
caggaggagtacgtcatcgaagcggaccgggagctggccaagggacaggccgtcttcaac
gtgagcttcatggactgcggtagaggaaaggtgtggttccaggttgacaattcgtctgac
ttcagggtgagtgaggatggtgcgatccacaccctgcggcgcctcagcctggtgggaagt
ggaaaagttgtggaggtggtctacgccagagacccagagtccaaacaggtctggaagacc
agagtgcacctccgcgtccatccaaatggccacagcgcaggacctgaacaggtgaggccc
agtgatgcaacacagactcggcgggtaccagagatcttgtttccgtggcgcagtgtggtt
gtcaggggcgatggatctctgaggcgggtgaagagggactgggtcattccgcctatcaac
gtccctgagaactcgcgaggacagttccccgaggacctagtcagaatccgctcagaccgg
gataagaatcggttgctgcggtacagcgtgacgggccccggggccgaccagcctccgacc
agcatcttcatcatcaacccaatctcaggccagctgtccgtcaccaagcctctggacaga
gagcacatctccaacttccatctgcgagcccacgcggtggacctgaatgggaatcaggtg
gagaaccccatcgacatcgtcatcaacgtcatcgaccagaacgacaacagaccagagttc
acacacaccatcttcaatggctctgtaccggagggatccaagcctggatccttcgtgatg
acggtgacatccgtggataaggatgatcccaaaaccgctaatgggatgctgcgatacaag
atcctctcccagaatccccagagcccctccaccaacatgttcaccattaacaacaagacg
ggtgacatcatcaccgtggcagcaggtctcgatcgggagaaagtcacccagtacaccctg
atcatccaggctacggacatggaggggaaccccacctatggcctgtccaacactgccacc
actatcatcaggatcaccgacgtcaacgacaacccgcctgaattcaccaccgacacgttt
ttcggggaggtccatgagaacagggtgaatgtgatcgtggccaacctgactgtgacggac
aaagaccagccacacacatcggcctggagcgccgtgtaccgcatcatcgccggagacccc
aacggacgcttctccatccccaccgaccacaccaccaacgaaggcctgctcactgtggtc
aagcccatagattttgagttgagccgatccttcatgctgacggtggaggcagagaacgag
gtcccgctggcccgtggaatccacctgccgcgtcagtccacggcgaccgtctccgtgcgg
atcctggacgtcaacgagagtccggaattcagcccaaatcccaagtccatcaaactggag
gagggtctgcacgcggggtctctgctcaccaccttcactgcccaggacccagaccgcttc
ttgagacaaaccgtccggtactcaaagatgtacgaccccgctaactggctggagatcgac
ccggttaacggtcgcatttccaccatcgccatccttgaccgagagtctccctatgtcaag
aacaacctctacaacgtcaccttcatggcctctgataacggtatccctcctgccagcggg
acgggcacccttcagatgttcctgctggacataaatgacaatgcacctcacgtgttcccc
cctgaggtggaaatgtgtgagaagccgtacccaaacgccatcaacatcacagccagtgac
cccgatctgacccataacgctggacccttcgccttcgagctggccaatcgtccattagac
gtacgccgcaactggacactgaatcgcatcaatggcgagtacgcccagctgagactgagg
atcggctccctggccagcgggatctacgaggttcccatcgtgatcacagactccggcaac
ctgcccatgtccaacacgtccttcctgagggtcaaggtctgccagtgtgataaccacggc
gactgcgtggacatggagcgaatcatcgctgctggactgggcaccggagccatcatcgct
atcctcatctgtatcatcatactattagtgctggtgctgctgtttgtcatgtggatgaag
aggagggacaaggagcgtcaggccaagcagctcctcatcgacccagaggacgacgtgcga
gacaacatcctgaaatatgacgaagaggggggaggagaggaggaccaggactacgacctg
agtcagctgcagcagcctgacgccctggagccagagtgcgtcaaggtgggcatcagacgt
ctggatgagaggcctctccatcatgaccaccagtaccccatccgctctgccgccccccac
ccaggagacatcggagacttcatccacgagggcctgaaggcagcggacaacgaccccacc
gctcccccctacgactccctgctggtgttcgactacgagggcagcggctccgacgccggc
tcccttagctccctgcactcctcctcgagctgcggcgaccaggactacgactacctcggc
gactgggggccacgcttccgcaagctggccgacctgtacggcggaggggacgactag
DBGET
integrated database retrieval system
