Anoplopoma fimbria (sablefish): 129111968
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Entry
129111968 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: methyl-CpG-binding domain protein 5-like
KO
K23219
methyl-CpG-binding domain protein 5
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
129111968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129111968
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
129111968
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
129111968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
MBD
Motif
Other DBs
NCBI-GeneID:
129111968
NCBI-ProteinID:
XP_054480107
LinkDB
All DBs
Position
22:complement(3347973..3367456)
Genome browser
AA seq
1434 aa
AA seq
DB search
MNGGKDCEAGDERQAVPVQVPIGWQRKPDHGGGVVYISPSGSVLSSFEQVKTYLLTDGTC
KCGLECPLILHKVFNFDPGAAVKQRTAEDVKADEDVTKLCIHKRKLLAVATLHRSMGTHP
PLTLTSPGGGTSSVVVAHSTSQRAIRTRPRDGLPNAVGPDCKNPFKMMMAAGQQHQQRLY
PPHEMGGAQQPELYSGYHRQRLSSGEPGPKSPYRVGYGGMLSPPPSSVKLYGDGSQSPSA
DTLGSPDGFPRTNPCGFPGAGSPGSASIHGNTRTPLSPPSLMLHGSPAGQPSCAMTGRTS
TPLSPTATAKSPVMNMPRGNFPPGMDLSRAAFHHKTQPPLHPVPPPPSIPPSCALQKRQL
TSEKDPLGILDPIPIKLVSQPPTNAPNPSNFQPNIHSQVQMMNVNIPPPAIVPLPSNLPL
PTVKPGPLGHGGHVQRTQQGGPASSMSPSPVTSPVHMAGPVLGRMEASPHRSRSSSTSSE
HGNFAMPSGHQVPCGNMKVPPRSPRSAMGSPRPSMPSSPSTNKTDLHHQYKDSQMLPGMG
NSIGAQQHSNPMYSPTSSSSSSSSLATPSASQKGHPGLLGMPLNQILNQQNAASFPASSL
LSAAAKAQLANQNKLGAAGNSPAGMGAGGGGNGGGGGGGHPGSMSGPRGMEGHSTLNSML
PPNSTMLLNTPEGQSGRAALRDKLMAQQRDPMRKRKQSSGSAAVNHDNSNNMVYNMLNKR
GMGGPHMAGPSATEQLRKVGRLGNLPPNTSMAQLLQSMSCQSSHSHRPGLSPGPGPQGSA
QLHYNDSTGMVPAGPQQNLLAQQRLRGPVDAMQHCQNIDTSGGHLGSRPGQFPDMIAQMQ
ASSMSNCGPMGPGGGPVGPDGMPLGRPHTNPPPLSHPGPHPSQQNLLHGMGRTTMVVMPH
GGGDGSCTQTIADSGNPSSLGCGMGGLQPHVNTGVGQMYQQQVHQGMQQGVASHPVYQGQ
QHFSDNAPYTNGNNANASSMACLYQNYQPGMLSHPQFREEQQPQGEGLPAGAPGGDRGGG
PESVDAIYRAVVDAASKGMHVTITTTVSGTTQASPVPALSAMSAFTASIGEPVNLPQAVS
SVLHRHQDGEALPQQARARQVRPGRGQKNMDPGKRTPDGPEANDYFRSPGRGTPRGQWDG
EAQHXGGFDSHSNNSAWGGEEFLECSTQVRSSPCMERPASLAPAPPCPTEGSNDHGLVMS
HDKAFLDDGYRFNNCHRTPTNYKERLEQTVERCVHINGATPHFTTRGYGEVLGPPRQELT
GDDQSPSSSTSLEGPLATAKDYSHYNGHFNGMAPSPSDTKSLSSEEDLRQPDSPSSELLH
YRSRTFNMGELVWGQLKGFPPWPAKLAGDEQVHSAAMQLREQAKVEPEKLKTLTHDLEAL
DRAAKRGLKPGKLNNHLEAAIHEAMSELDKMSGTIPSRDRQVKLPKPKRRKISR
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcggaaaggactgtgaggcgggagacgagaggcaggccgtccctgtccaggtc
cccattggctggcagcgcaagccggatcacggcggcggggtcgtatacataagtcccagt
ggctcggtgctgtccagctttgagcaggtgaaaacctacctgctgacagatggaacctgc
aaatgcggcctggagtgcccactcatcctccacaaggtgttcaacttcgacccaggggca
gctgtcaagcagaggacagcggaggatgtgaaagcagacgaggacgtcaccaaactctgc
attcacaagaggaagcttctggcggtggccacgctgcacaggagcatggggacgcacccg
cctctgacactcaccagtccagggggaggtacatcatctgtggtcgttgcgcattccacg
tctcaacgagcaataaggactagaccccgcgatggcctgcccaacgctgttggcccagac
tgcaagaatcctttcaagatgatgatggcagctggacagcagcatcagcagaggctgtat
ccaccccatgagatgggtggagcccagcagcctgagctctactctggctaccacaggcag
aggttgagcagtggggagccaggccccaaatccccttaccgggttgggtatggaggcatg
ctgagcccacctccctccagtgttaagctgtatggagatggctcacagtctcccagtgca
gacactctgggcagccctgatggctttccgaggaccaatccttgtgggtttccaggagct
ggtagtcccggctcagcctccatccatgggaacactaggacgcctctctctccacccagt
ttaatgctccatggctctcctgcgggccagccatcttgcgccatgacagggaggactagc
acgccactctcccccacggccactgccaaaagccctgtcatgaacatgccccgggggaac
ttcccccctggtatggatctgtcccgtgcagcatttcaccataaaacgcagccacctttg
catcccgtaccgccccctccatccataccaccatcctgtgcccttcagaaaaggcagttg
acttccgaaaaagacccattaggcatcctagaccccatccccattaagctagtcagccag
ccccccaccaacgctccaaacccctccaacttccagcccaatatccactctcaggtacaa
atgatgaatgtaaacataccccctcccgccatcgttcccttgccaagcaacttaccttta
cccacagtgaagcctggccccttggggcatggcggccatgttcaaaggactcaacagggt
ggtccagcttcctccatgtccccatcccctgtcacttcgcctgtccacatggcaggtcct
gtccttggcagaatggaggcctcccctcatcgctctcgctcatcctccacctcctctgaa
catgggaactttgcaatgccctcggggcaccaggtcccatgtggcaacatgaaggttcct
ccacgttcccccaggtctgccatgggatctcccaggccttccatgccctccagcccctcc
accaacaaaactgacctgcaccaccagtacaaagactcccagatgctgcccggcatgggg
aactcgattggcgcccagcagcacagcaaccccatgtactcgcccacctcttcctcctcg
tcatcttcttctcttgcaacccctagcgcttcccagaagggccacccaggactcctgggt
atgcccctcaaccagattctcaaccaacagaatgccgcttccttccccgccagcagtctc
ttgtcagccgcagccaaagcacagctagcaaatcaaaacaaactcggcgctgctggcaac
agccctgctggcatgggggctggtggtggaggtaatggaggaggtggtggcggaggacac
cctggctctatgagcggccctcgaggcatggagggacacagcactttaaactcaatgctc
ccgccaaactccaccatgctgctcaacactcctgagggccagagcggtcgggctgctcta
agagacaagctcatggcccagcagagggaccccatgcgcaaacggaagcagtcgtcaggc
agcgccgctgtaaaccacgacaacagtaacaacatggtctacaacatgctcaacaaacga
ggcatgggaggaccacacatggcggggcccagcgccactgagcagcttcggaaagtgggc
cgccttggaaaccttccaccaaacacctccatggcccagcttctccagtccatgagctgc
cagagctcccacagccatcgtccaggtcttagccctggcccaggtcctcaaggatccgct
cagctgcactacaacgacagcactggtatggtccctgctggccctcagcagaacctccta
gctcagcagaggcttcggggtccagtggacgccatgcagcactgccagaacatagacacc
tctgggggccatctgggctctcgtccgggccagttccctgacatgatagcccagatgcag
gcctcctccatgagtaactgtgggcctatggggccgggaggtggaccggtgggccccgat
ggcatgccgctgggacgcccccacactaaccccccaccgctgtcccaccccggccctcac
ccctcacagcagaacctccttcacggtatggggcggactaccatggtagtgatgccacat
ggaggtggtgatggaagctgtacacagaccatcgctgattcgggaaacccctcatccctc
ggctgtggtatgggcggcctgcagccacacgtcaacaccggtgtaggtcagatgtaccag
cagcaggtccaccagggcatgcagcagggggtggcctcccacccagtctaccagggtcag
cagcacttctctgacaacgcgccctacactaacggaaacaacgccaacgccagctccatg
gcctgcctctaccagaactaccagccggggatgttgtctcacccgcagttcagggaggag
caacagccccaaggcgaagggcttccagcgggtgcacccggcggtgacaggggtggaggc
ccagagtcggtggacgccatctacagagccgtggtggacgccgccagcaagggcatgcac
gttaccataaccaccacagtgagcgggaccacacaggcgagtccggtgcctgccctcagc
gccatgagtgccttcactgcttctataggggagccggtcaacctcccacaagcagtcagc
tcagtcctgcacaggcaccaggacggagaggcgttaccccagcaagccagagcgaggcag
gtgaggccgggacggggtcagaagaacatggatccggggaagagaactccagacggccct
gaggccaacgactacttccgttctcccggtcgtgggactcccagagggcagtgggacggg
gaggcgcagcacnggggaggcttcgactctcacagcaacaacagcgcctggggtggtgag
gagtttctggagtgctccacccaagtgaggagtagcccctgcatggagcgacccgccagc
ctggcccccgccccgccctgccccacggagggctccaacgaccacggtctggtcatgtcc
cacgacaaggccttcctcgatgacggctatcgcttcaacaactgccaccggacgcctact
aactacaaggagcgtctggagcagacggtggagcgctgcgtccacatcaacggcgccact
cctcacttcaccacccggggttacggggaagtcctgggccccccacggcaggagctgacg
ggggacgaccagtcgcccagctcctccaccagcctggagggccctctggccacagccaaa
gactacagccactacaacggccacttcaacggcatggcgcccagcccctcggacacaaag
agcctgagcagcgaggaggacctgcggcaaccggactctccttcctcagagctgcttcac
taccggtccaggaccttcaacatgggagagctggtctggggccagctgaagggcttccca
ccttggcctgccaagcttgcaggggacgaacaagtgcacagtgcggcgatgcagctgcgg
gagcaggccaaggtagagccggagaagctaaaaacactaacgcacgacttggaggcactc
gaccgagccgccaaaagaggcctgaaaccggggaaactgaataatcacttggaagctgct
atccacgaggccatgagtgagctggataagatgtcgggcacaatcccatcgagggatcgt
caggtgaagctcccgaagcctaagaggaggaagatatccagataa
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