Anoplopoma fimbria (sablefish): 129111979
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Entry
129111979 CDS
T09102
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3-like isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04080
Neuroactive ligand-receptor interaction
afb04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129111979
04082 Neuroactive ligand signaling
129111979
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129111979
Ion channels [BR:
afb04040
]
Ligand-gated channels
GABA-A
129111979
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
129111979
NCBI-ProteinID:
XP_054480125
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Position
22:9881103..9909972
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AA seq
507 aa
AA seq
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MFALHRVRQFRVLSALVVGSIVCCAKSVNEPGNMSFVKETVDKLLKGYDIRLRPDFGGAP
VAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAYIGIPLNLTLDNRVADQLWVPD
TYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIEFYWKGGGSAVTGVTRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLK
RNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKI
PYVKAIDMYLMGCFVMVFLALLEYAFVNYIFFGRGPQMQKKLAEKAEKANNERAAKYDAA
REAGSRTASLKRSNQVKGLRHSRSAEPHGHGNILLTTLEIHNEVAGGEITTSLADIRNSQ
SMVQLDSTASSHIQYRKQSGGIGPRSASRHSLDRAAQIKRSRLRRRSSQLKIKIPDLTDV
NAIDRWSRIIFPSVFSLFNLIYWLYYV
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctctgcacagggtccgtcaattccgcgtcttgtccgcgctggttgtcggttcg
attgtgtgctgcgcgaagagcgtcaacgaaccgggcaacatgtctttcgtgaaggagacg
gtggataaactgctgaagggctatgacatccgactgaggccggactttggaggggcccct
gttgcagtcgggatgagcatagacgtggccagcatagacatggtgtcagaagtcaacatg
gactacacgttgaccatgtatttccaacagtactggagggacaagcgtctagcctacata
ggaatccccctcaacttgaccctggataacagggttgccgaccagctctgggtccccgac
acctacttcctcaacgacaagaagtctttcgtccacggagtcaccgtcaagaaccgcatg
atccgcctgcatccggacggaaccgttctctatggcctcaggataactacaacagcagca
tgtatgatggatctcaggaggtatcccctggacgagcagaactgcactctggagatagag
agctatggctacaccacagacgacatcgagttctactggaaaggaggcggctcggctgta
accggggtgacgcggatcgagttgcctcagttctccattgtcgattacaagctggtgtcc
agaaacgtagtcttttccacaggtgcctaccctcgactgtctctgagcttcaagctaaag
aggaacatcggctacttcatcctgcagacgtacatgccatcgatcctgattaccatcctc
tcctgggtctccttctggataaactatgacgcgtcagcagccagagtggctctagggatc
accacggtgctgaccatgaccacgatcaacacccacttgagggagacgctgcccaagatt
ccgtacgtcaaggccattgacatgtacttgatgggctgctttgtcatggtcttcctggcc
ctgctggagtacgccttcgtcaactacatcttcttcgggaggggccctcagatgcaaaag
aagctcgccgagaaggcggagaaggccaacaacgagagggcggccaaatacgatgctgcg
agggaggcaggtagtaggaccgcgtccctaaagcggtccaatcaggttaaaggtcttcgc
cactcacgctcggcggaaccacacggccacgggaacatcctgctaaccaccctggagatc
cacaatgaggtggcgggaggcgagatcaccaccagcctggcggacattaggaactctcag
tccatggtgcagttggacagcacggcctcgtcgcacatccagtaccgcaagcagagcggc
gggatcggcccgcgctccgccagccggcactccctggaccgcgccgcccagatcaagcgc
agccgcctgcggaggcggtcctcgcagctcaaaatcaaaatcccagacctgacggatgtg
aacgccatcgaccgctggtcacggatcatcttcccttccgttttctcactgttcaacctc
atctactggctctactatgtctga
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