Anoplopoma fimbria (sablefish): 129111980
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Entry
129111980 CDS
T09102
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04080
Neuroactive ligand-receptor interaction
afb04082
Neuroactive ligand signaling
afb04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129111980
04082 Neuroactive ligand signaling
129111980
04519 Cadherin signaling
129111980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129111980
Ion channels [BR:
afb04040
]
Ligand-gated channels
GABA-A
129111980
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
129111980
NCBI-ProteinID:
XP_054480127
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All DBs
Position
22
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AA seq
470 aa
AA seq
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MEVMDLHSALNNKVSRISVMVRLVLALLLLCGCQNSRCLSSTEAQKEAAANDNSTVFTRI
LDGLLDGYDNRLRPGLGENVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFK
GPMEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAE
CPMQLEDFPMDAHACPLKFGSYAYPVSEVVYTWTQGAAKSVVVAEDGSRLNQYHLIGQTA
GTENIHTSRGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVF
GVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWD
GKKALEAQHPKKRDPMVLSKKPNNVCSAGVNYTPNLTKDVSISTISNTTSVQLRGSETKL
VDPKKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVVKGVVTST
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgatggatctacattcagctctgaacaacaaagtgagcagaatttcagtcatg
gtgaggctcgtccttgccctcctgctcctgtgtggatgccaaaatagtcgctgcctgtcc
tccactgaggcccagaaggaggcagccgccaacgacaacagcaccgttttcaccaggatc
ctggacgggctccttgacggttatgacaacaggcttcggcctgggcttggagagaatgtc
acagagatcaagaccaatatttttgtcaccagcttcggcccagtgtctgacacggagatg
gaatataccatagacgtcttcttccgtcagagctggaaggacgagcgtctgtgcttcaaa
gggccgatggagatgctgccgttgaacaacctgctggccagcaacatctggacccccgac
accttcttcctcaacggcaagaagtctatcgcgcataacatgactacgcccaacaagctg
ctgaggctcaaggacgacggcactttgctttacactatgagactgaccatatctgcagaa
tgccccatgcagctggaggatttcccaatggacgcacacgcctgccctctcaagtttggc
agctatgcctatccggtgtcagaggtggtctacacttggactcagggagctgctaagtct
gtggtggtggcggaggatggctccagactcaaccagtaccatctcattgggcaaaccgcc
ggcacagagaacatacacacaagcagaggacagtacacagtgatgatggcccacttctac
ctgaagaggaagattggatattttgtcatccagacgtatatgccctgcttcatgactgta
atcctgtcccaggtgtcattttggctaaacagagaatcggttcctgcgaggactgtcttc
ggggtgacaactgtgctgaccatgaccaccctcagcatcagcgccaggaactcacttcct
aaagtggcttatgccacggccatggattggttcatcgccgtctgctacgcctttgtcttt
tccgccctcatcgagtttgccacggtgaactacttcaccaagaggagctgggcctgggac
ggcaagaaggctctggaggcacagcaccctaagaagcgagaccccatggtgctgtccaaa
aagcccaacaacgtttgctcggcgggcgtcaactacacccccaacctcaccaaggacgtg
tccatctccaccatctccaacacgacgtcggtgcagctccggggctctgagaccaagttg
gtggaccccaagaagacctacaacagcgtcagcaagatcgacaagatgtcgcggatagtg
tttcccgtcctgtttggaaccttcaacctcgtctactgggccacgtacctgaacagagaa
ccggtggtgaaaggagtggtcacctcaacgtaa
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