Anoplopoma fimbria (sablefish): 129112026
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Entry
129112026 CDS
T09102
Symbol
nlgn1
Name
(RefSeq) neuroligin-1 isoform X1
KO
K07378
neuroligin
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129112026 (nlgn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129112026 (nlgn1)
Membrane trafficking [BR:
afb04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
129112026 (nlgn1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
COesterase
Abhydrolase_3
BD-FAE
Motif
Other DBs
NCBI-GeneID:
129112026
NCBI-ProteinID:
XP_054480170
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Position
3:11720571..11997917
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AA seq
803 aa
AA seq
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MLLLQPSPTAVSAEKLDENDPVVTTTYGKLRGIKKELNNEILGPVVQFLGVPYASPPTGE
HRFQPPEPPASWPEIRNATHFAPVCPQSIVEGRLPDVMLPVWFTNSIDVVSTYVQDQSED
CLYINIYVPTEDGPLTKKHTDDLGDSDRTDDEDIRESGSPKPVMVFIHGGSYMEGTGNMF
DGSILASYGNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWTSENIAAFGGDP
LRITVFGSGAGASCVNLLTLSHYSEGLFQRAIAQSGTALSSWAVSFQPAKYARMLARKVG
CNLEDTVELVGCLQRKHYKELVDQDIQPARYHIAFGPVIDGDVIPDDPQILMEQGEFLNY
DIMLGVNQGEGLKFVELIVDNENGVQANDFDYAVSSFVDDLYGYPEGKDILRETIKFMYT
DWADRHNPETRRKTLLALFTDHQWVAPAVATADLHSSFGSPTYFYAFYHHCQTEQVPPWA
DAAHGDEIPYVFGLPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTK
FIHTKPNRFEEVAWTRYNQKDQLYLHIGLKPRVKEHYRANKVNLWLELVPHLHSLNEVTQ
LIPTTTKIPPPEATNRTPKTKVLVTKRPNPTPFPTETQDSHIQPHLVDQRDYSTELSVTI
AVGASLLFLNILAFAALYYKKDKRRHDVHRRCSPQRSAANDLAHTQEEEIMSLQMKQHSD
LDCRGVGDSLHPHDVVLRTACPPDYTLAMRRSPDDIPLMTPNTITMIPSTMGGLTSLHSF
NTFPTSGQNNTLPHPHSHSTTRV
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctgcagccatctccgactgctgtgtcggctgagaaactcgacgagaacgac
ccggtggtcaccaccacgtacggcaagctgcgtggcattaagaaggagctcaacaacgag
atcctgggtcccgtcgtgcagtttcttggcgtcccatacgcttccccacccaccggcgag
caccgctttcagcctcccgagccaccagcgtcgtggccggagatccgcaacgccacacac
tttgccccggtgtgccctcagagcatcgtggagggccgcctgccggacgtgatgctgccg
gtgtggttcaccaacagcatcgacgtggtgtccacttacgtccaggaccagagcgaggac
tgcctctatatcaacatctatgtccccactgaggatggtccccttacaaagaaacacact
gatgatttaggtgatagtgaccgcacggacgacgaagacattagggagagtggaagcccc
aagccggtgatggttttcatccacgggggctcctacatggaaggaactggaaatatgttt
gacggcagcatcctggccagctatggaaatgtgattgtcataaccgtcaactaccggctg
ggcgtcctaggattcctgagtacaggagaccaggccgccaaagggaattacggcttgctg
gaccagatccaggctctgcgctggaccagtgagaacattgcagcctttggcggcgaccca
ttacgtatcactgtgtttggctctggcgctggggcttcctgtgtcaacctgctcacactg
tctcactactccgagggtctgttccagagggccatcgcccagagcggcacagctctgtcc
agctgggctgtaagttttcagccagccaagtatgcccggatgctggcccgtaaggtgggc
tgtaacctggaggacactgtggagctggtggggtgccttcagaggaaacattacaaggag
ctggtggatcaggacatccagccagcccgctaccacattgcctttggacctgttattgat
ggagatgttatacctgatgaccctcagatactcatggagcaaggtgaattcctcaactat
gatatcatgctgggagttaaccagggcgagggccttaagtttgtggagcttatcgtggac
aacgaaaacggtgttcaggctaacgactttgactacgccgtgtccagctttgtggatgac
ctgtatggctacccagaggggaaagacatcctccgagaaaccatcaagttcatgtacaca
gactgggccgacaggcacaacccagagacccgccggaaaacactgctggcccttttcacc
gatcaccagtgggtggcaccggctgtcgcaacagctgacctgcactccagcttcgggtct
ccgacatacttctatgccttctaccaccactgtcagacagaacaggtaccaccgtgggca
gacgcagcacatggagatgagatcccatatgtgtttgggctaccgatgattggtccaaca
gagctgtttccctgcaacttctccaagaatgatgtgatgctcagtgccgtggtcatgacc
tactggacaaactttgccaaaacaggggatccaaaccagcctgtcccccaggacaccaag
ttcatccacaccaagcccaatcgttttgaagaggtggcatggacacgctacaaccagaaa
gaccaactttacttacacattggcctgaagccccgggtcaaagagcactaccgtgccaac
aaggtcaacttgtggttggagcttgttcctcatctgcacagcctcaacgaggtcacccag
ctcatcccaaccaccaccaagatccctccacctgaggctaccaaccgaaccccaaagacc
aaggttctggtgaccaaacgccctaacccgactccgttccccactgagacccaggacagc
cacatccagccacacctggtggatcagcgcgactactccactgagctgtcggtgacaatc
gctgtaggagcttccctgctcttcctcaacattctggcctttgccgccctttactacaag
aaggacaagcgccggcatgacgtccacaggcgctgcagcccccagcggagcgctgccaac
gacctggctcacactcaggaggaggagatcatgtccctgcagatgaagcagcactcagac
ctggactgcaggggagtgggcgactccttgcacccgcacgatgtggtgctgaggactgcc
tgtccaccggactacactctggccatgaggcgctcaccggacgacatcccgcttatgacg
ccaaacaccataaccatgatcccaagcaccatgggggggctcacctcgctccactctttc
aacaccttccccaccagcgggcagaataacaccctaccccatccgcactcacactccacc
acccgggtatag
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