Anoplopoma fimbria (sablefish): 129112241
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Entry
129112241 CDS
T09102
Name
(RefSeq) basic helix-loop-helix ARNT-like protein 2 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129112241
Transcription factors [BR:
afb03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
129112241
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_INO4
ATPase
Motif
Other DBs
NCBI-GeneID:
129112241
NCBI-ProteinID:
XP_054480218
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Position
23:complement(15994934..16011931)
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AA seq
608 aa
AA seq
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MSAGGSDGTADRRADLAAEEEGPNQAGSSLPAVELPRKRKGDVEERHSVDFQLDDDLGRS
EEEDQQVKIKCFREPHRQIEKRRRDKMNNLIDELAAMIPACQPMARKLDKLTVLRKAVQH
LRALKAGTSSAFTNTNHKPSILPQDDLRHLLLRAADGFLLIVSCDRAKVLFISESVAKIL
NFSRFELTGQSLFDFIHPKDINKVKEQLSSSEYPRQRLIDAATGVQVQVDAPARPPHLST
GARRSFFCRMKHSRVAGKQEDKHLLPCAPKKKDTHRYCTLHCTGYMRSWPSSQLDSEGDA
EKETSNLTCLVTVCRLLTHVPNQPSKDINIKPSEFVTRCAIDGKFTFVEQQATTVIGYLP
QEVLGTSCYEYFHQDDLRHLAEKHRQAVLRSKEKIETQCYKFKTKYGSYVSLQSQWFSFT
NPWTKEVEFIVSSNRVVSRGPGHTKDEETGGSKALQEDSKQIPIIPGLSSGVGTMIYAGS
IGTQIANELIDSYRMNSSPSSGASSPFGPAQEKCPLVSPQTSTSASSREEAAGSSSQSQS
DSRTAVGAGSATSESSGEQSQLDLDSMVVPGLSSFSSDEAAMAVIMSLLETDVNMGQSGD
FEDLHWPF
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcggctccgacgggacggcggaccggcgggcagatctcgctgcagaggag
gaaggcccaaaccaagcgggctcctcgctgccagctgtcgagctgccaaggaaacggaag
ggagatgtggaggagaggcacagcgtcgacttccaattggatgatgaccttggcagatcc
gaggaagaggatcagcaagtcaaaataaaatgcttcagagagccccaccggcagatcgag
aagcggcggagggataagatgaacaacctcatcgacgagctggccgccatgatccccgct
tgtcagcccatggctcggaaacttgacaaactcactgtcctgcggaaagccgtgcaacac
ctgagagccctcaaagctgggacgagtagcgcctttacaaacaccaaccacaagccttca
atcctgcctcaagatgacctcaggcaccttctgctcagggctgctgatggtttcctctta
attgtaagttgtgaccgggctaaagtcctgttcatctccgagtccgtcgccaagatcctc
aactttagtcggtttgagctgactgggcagagcttgttcgatttcatccacccaaaagac
atcaacaaggtgaaggagcagctgtcgtcttcggagtaccctcgccaacgcctcattgat
gctgccactggggttcaggtccaggtggatgcccccgccaggccgccccacttgtccact
ggagcccggagatccttcttctgccggatgaagcacagtcgggtggcggggaagcaggag
gataaacacttgctgccctgtgctcccaaaaagaaagacactcacagatactgtaccctc
cactgcactggatacatgcggagttggccgagcagccagctggactccgagggtgacgca
gagaaggaaacctccaacctgacctgcctggtgacggtgtgccgccttctcacccacgtt
cccaaccagccttccaaagacatcaacatcaagccctctgagttcgtcacccgctgtgcc
atcgacggaaagttcacttttgtagaacaacaagccacgacagtcattggttatttgccg
caggaagttctcggcacgtcgtgttacgagtacttccaccaggacgacttgcggcacctc
gcggagaaacacaggcaagcagttcttcgaagcaaagagaagatcgagacacagtgctac
aagttcaaaacgaaatacggctcctacgtttccctccaaagtcagtggtttagtttcacc
aatccttggaccaaagaagttgagtttatcgtgtcttcaaacagggttgtctccaggggg
cccggtcacacaaaagatgaggagaccggcggctctaaagcacttcaggaggactcaaag
cagatacccataattcccggcctttccagcggtgtgggcactatgatctatgcaggcagc
atagggacccaaattgctaatgagctcatcgactcctacaggatgaactcctctccatca
agtggagcttccagtccgtttggcccggcccaggagaaatgtccactggtttccccgcaa
accagtacaagtgcttcgagcagagaggaggcggctggcagttcttcacagtcccagtct
gactcgaggacagcagtgggcgccggcagtgcaacttctgaaagttcaggcgagcagtcc
cagctggacttggacagcatggtggtgccaggcctgagcagtttcagcagcgacgaggca
gccatggcggtcatcatgagcttgctggagactgatgtgaacatgggtcaatcgggagac
tttgaggacctacactggcctttctag
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