KEGG   Anoplopoma fimbria (sablefish): 129112306
Entry
129112306         CDS       T09102                                 
Symbol
parpbp
Name
(RefSeq) PCNA-interacting partner
  KO
K27412  PCNA-interacting partner
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:afb03400]
    129112306 (parpbp)
DNA repair and recombination proteins [BR:afb03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     129112306 (parpbp)
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    129112306 (parpbp)
SSDB
Motif
Pfam: GreA_GreB_N UvrD-helicase
Other DBs
NCBI-GeneID: 129112306
NCBI-ProteinID: XP_054480330
LinkDB
Position
23:4462398..4476106
AA seq 594 aa
MEALGDRLKVMVKIFRRECHRVINSERTTIHGADGMLMLLQLAIAEVNKQHAGEFKVALS
DVLMAWKHLLLDKLHLPPPNSARLENYDLILEAYESSLKRSNTVDLVDILSMYEQLRLVD
SDPGEPVSPILLFEFLSGNMEVSELPDSSVPSTPSSKSRGCSSQVKMAVRRVFCSYLNLL
VNAKNDMALALTLDVPSRTLGRQAFTDIKHAAHNNNTSLFLAVTSFVRAIQLGGKGYAPA
ESDPLRKHVKGLSDFVQFLDNLEEILGEIPNPSVCGARLVSAIRAALVKGRSSEDPVYAA
AEETTKELKERICQLHQIQKQTANGIGTGISPARPKAYAVNHCTAYGGRDTVKVLMALLD
EEALTPPCRNKADLLSEDQPVLSGAEATCILSLFRSPEVSTGCSPEPLKNRVQSRLDLLK
PKAKERGIRSQFACTYKDEEMPLNRVLEFPSSSQVPTCVHPAPKHHTIPAVDEECSSDVE
ETTKVFPAKSTSECPNKEQSGVRRGAALGPRSGNAQNRVAGPANRKKTGTEAQRKGNKRK
QVDSDQHGGSENEPPEKKQLTCVPVKVPGKNVSKASSKKKLIAGQGKLTSFFRL
NT seq 1785 nt   +upstreamnt  +downstreamnt
atggaggctttgggagatcgtctaaaggtgatggttaaaatcttcaggcgagagtgccac
agggttataaactctgagaggaccaccattcatggagctgatggcatgctaatgttgctg
cagctggccatagcagaagttaacaagcagcacgctggagagttcaaagtggctctgagt
gatgtcctgatggcctggaaacacttactgctagacaaacttcacctgccaccccccaac
tctgcacgcttggagaactatgatctcatcctggaggcttacgagtcctccctgaaacgc
tccaacaccgtggacctggttgatatcctctccatgtacgaacagttgagactagtggac
tcagacccgggggagcctgtgagcccgatcctgctgtttgagttcttatctggaaacatg
gaggtctcagagttgccagactcttcagtcccatcaacaccatctagtaaaagcagaggc
tgcagctcacaggtgaaaatggccgtcagaagggttttctgctcctatctgaatctgctt
gtgaacgccaagaacgacatggccttggcgctgaccctcgacgtccccagtcgcactctt
ggacgacaggcatttaccgacatcaagcatgccgcgcacaacaacaacacctctctattc
ttggctgtgacatcttttgtgagggccatccagctcggagggaagggctacgctccagct
gagtctgacccactgaggaagcatgtcaaaggcctgtctgactttgtccagtttctagac
aacctggaagaaattctgggagagattcccaacccaagcgtgtgtggagccaggctggtc
agcgccatcagggcggcgctggtgaagggacgcagcagtgaagacccggtgtacgctgca
gccgaggagacgacaaaggagctgaaggagaggatctgccagctacaccagatccagaaa
cagaccgctaatggaatcgggacggggataagccctgccaggccaaaggcttacgcagtc
aatcactgcactgcatacgggggtcgggacaccgtgaaggtgctgatggctctgctggat
gaagaggcgctgactccaccgtgtcggaacaaagcagaccttctgtctgaggaccagccc
gtcctcagtggagccgaggcgacctgcatcctcagcttgttcagatcccctgaagtgtct
actggatgttctccagaacctctaaagaaccgagtccagagccggctagacctgctcaaa
cccaaggccaaagaaagaggaattcgatcccagtttgcatgcacatacaaagatgaagaa
atgcctctcaaccgtgtgctggagttccccagcagcagccaggtccctacctgtgtgcac
ccggcacccaaacaccacaccatcccagctgtggatgaagagtgcagctctgatgtggag
gagacgaccaaagtctttccagccaagtccacttctgaatgcccgaataaggagcagagc
ggcgtgcggcggggggctgctctcgggccaagaagtggaaatgcccaaaacagagttgcg
ggccccgccaatagaaagaaaactggcactgaggcgcagagaaagggcaacaagaggaag
caggtggattctgaccaacatggaggatcagagaacgagcctccggagaagaaacagctc
acttgtgtccccgtcaaagtgcctggcaagaatgtcagcaaggcctccagtaagaagaag
ctgatagctggacagggaaagctcaccagcttcttcagactctaa

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