Anoplopoma fimbria (sablefish): 129112317
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Entry
129112317 CDS
T09102
Symbol
ptprr
Name
(RefSeq) LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase R
KO
K04458
receptor-type tyrosine-protein phosphatase R [EC:
3.1.3.48
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129112317 (ptprr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
afb01009
]
129112317 (ptprr)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
129112317 (ptprr)
Protein phosphatases and associated proteins [BR:
afb01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
129112317 (ptprr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Tc-R-P
PTP-SAK
DSPc
Y_phosphatase3
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
129112317
NCBI-ProteinID:
XP_054480340
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Position
23:complement(1345802..1371791)
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AA seq
713 aa
AA seq
DB search
MSCRRGRGGFVTMLLFLCLTWTQLLITESSSADHELRLFPSRRSTRLPPPLLELNPQHDV
DSVLESHLHRHLHLHHHHPHHHQRPARVASVAPAALLESRFRQESGGHRTLNLLARPHQE
VQPEHAVVSARHLVTVYLAVDVRRLNVSLLRWFREGVAAALGVPAGHVHINRLNEKKNGI
ELFVSSDRPGISEPRPAEEVIQSLNVRVLHRHLGHFGITEVSTEKNVLQGEQRDHVWSRE
GFYASPSVFLFFTIFVIITCLMVLYRLKEKVQVSDRQLKAPPPDLLLTPTVHSDSVQRSK
GTKFVTSGSMVQAELPPTVATPIRHQQPIVACRRLAPPPVVPLPPSSPFPVFSSIDHAPW
PALXPVTANNELKPCPSPFRMKPAAGLQERRGSNVSLVLDMSALGSVEPLSVAPVVTPRE
AAAREYLLAAGRPLTRQQLRDVVNNTHKLHAEFAEIPMNFIDPKELDIPNHGTKNRYKTI
LPNPHSRVILKSKSCNDPLSSYINANYTRGYLGGERAFIATQGPMVNTVNDFWQMAWQEE
SPVVVMITKLKEKNEKCVLYWPEKRGIYGKVEVLVNSVRECEHYTTRHLTLKCGNQTRVL
QHYWYTSWPDHKTPDSTMPLLQLMADVEADRRTAAAVGPVIVHCSAGIGRTGCFIATTIG
CRQLQLEGVVDVLSITCRLRADRGGMIQTGEQYEFVHHALSLFEARLSAETGQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgagctgcaggagaggaagaggagggtttgtcaccatgctgctcttcttgtgtctaaca
tggactcagctgctgatcacagagtcttcttcagctgaccacgagcttcgtctcttccct
tctcgtcgctccactcgtcttcctccacctctactggagctgaacccacagcacgatgtc
gacagtgtgctcgagtcccacctccaccgacatcttcatcttcatcatcatcatcctcat
catcatcagcgccctgccagggtagccagcgtggcgccggccgccctcttggagtctcgg
tttcggcaggagtctggcggccatcgaaccctcaacctgctggctcgacctcatcaggag
gtgcagccggagcacgccgtggtgtctgcacgccatctggttaccgtgtacctggctgtg
gatgtgaggaggctgaacgtcagtcttcttcggtggtttcgggaaggcgtagcggcggct
ctgggcgttcctgcaggacacgtgcacatcaaccgtctgaatgagaagaagaatggcatc
gagctcttcgtgtcctccgataggccggggatctccgagccccgccccgccgaagaggtc
atccaatcactgaacgtccgggtcctccaccgtcacctgggacacttcggcatcaccgag
gtctccaccgagaagaacgtcctgcagggcgagcagagggaccacgtgtggagcagagag
ggtttctacgcttcaccatctgtcttcctcttcttcaccatcttcgtcatcatcacctgc
ttgatggttttgtaccgactcaaggagaaggtccaggtttctgacagacagctgaaggct
ccgccccctgacctcctcctgaccccgactgtccactcagactccgtccagaggtcaaag
ggcaccaagtttgtgacgtcaggaagcatggtccaggctgagctccctccaactgtagcc
acgcccattcgccatcagcagccaatcgtagcctgccgccgcctcgctcctcctcccgtc
gtccctctgccgccctcctcccccttccctgtcttcagcagcattgaccacgccccctgg
ccagcgttgnncccggtgacggccaataacgagctgaagccctgcccctcccccttcagg
atgaaacctgcagcaggactgcaagagagacgtggctctaacgtctctctggtgttggac
atgtcggctctcggctccgtggagcccctcagcgtggcccccgtggtgacgcccagagag
gcggcggccagggagtacctgctggcggccggtcggcctctgacgcgacagcagctccgc
gacgtcgtcaacaacacgcacaagctgcacgccgagttcgctgaaattccaatgaatttt
attgatcccaaggagctcgatattccaaaccacgggaccaagaacagatacaagaccata
ctgcccaacccgcattccagagtgatcctgaagtccaagagctgcaacgaccctctgagc
tcctacatcaacgccaactacacacggggttacctaggcggcgagcgggcgttcatcgcc
acccagggtcccatggtgaacacggtgaacgacttctggcagatggcctggcaggaggag
tcgcccgtcgtcgtcatgatcaccaaactgaaggagaagaacgagaagtgtgttctgtac
tggcctgagaagcgggggatctacgggaaggttgaggttttggtgaacagcgtcagagag
tgtgaacactacaccacccgccatctcacactcaagtgtgggaatcaaacccgcgtgctg
cagcattactggtacacgtcatggcccgaccacaaaacacccgactctacgatgccgctg
ctgcagctgatggccgacgtggaggcggacagacggacggccgccgccgtgggaccggtc
atcgtccactgcagcgccgggattggccggacaggctgcttcatcgccacgacgataggc
tgtcggcagctgcagctggagggagtggtggacgtcctgagcatcacctgccgactccga
gccgacagaggtgggatgatccagacaggtgagcagtacgagttcgtccatcacgccctg
agtctgttcgaggcccgcctctctgcagaaaccggccaatga
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