Anoplopoma fimbria (sablefish): 129112390
Help
Entry
129112390 CDS
T09102
Name
(RefSeq) sorting nexin-4-like
KO
K17919
sorting nexin-4
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129112390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129112390
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129112390
Membrane trafficking [BR:
afb04131
]
SNARE
SNARE associated proteins
Others
129112390
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
129112390
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
129112390
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
129112390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
Motif
Other DBs
NCBI-GeneID:
129112390
NCBI-ProteinID:
XP_054480448
LinkDB
All DBs
Position
23:complement(18258220..18271177)
Genome browser
AA seq
435 aa
AA seq
DB search
MAEDGRDESLATDDESDNTAVDGIQSLNDTMVGEGSTLLRRMEICVAEAEKRNGKNTVNM
QETFTVYLVETRPMDAVAEGRNQAPDSLWRRYSEFELLRNYLLVTYPYIVVPPLPEKRAE
FVWHKLSADNMDPDFVERRRVGLENFLLRVASHPLLSNDKILHHFLTEEHGWKEVVYETG
FQAKADSRLRALSATFRVRNPDKRFMEMKHYSDELQSHTSQLLRARARVADRLYGVYKVH
GNYGRVFSEWSAIEKEMGDGLQSAGHHMDAYAASIDDILEEEEHYADQLKEYLFYAEALR
AVCRKHELTQFELEMASQDLISKKQQHEELATGIVRTFSFKGMTNKLFGQEAPEQREARL
KLLEELITEGEETVKEKTVECQEHVERAWVDMRRFKEQKDKDLREALINYAVMQISMCKK
GIQMWSNAKECFLKM
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggatgggagggatgagtcgctggccactgacgacgagtcagacaacacagct
gtagacgggatccagagcctgaacgacacgatggtgggagagggctccactctcctgcgc
aggatggagatctgcgttgctgaggctgagaaaaggaacggcaaaaacacggtgaacatg
caggagacgttcactgtgtacctggtcgaaacacggccaatggacgcggttgccgaaggt
cgtaaccaggccccggactctctgtggaggagatacagtgaatttgaactgctgcggaac
tacttgttagttacctatccttacatcgtggtgccccctctaccagagaagagggctgag
tttgtgtggcacaagctgtcggcagacaacatggacccagactttgtggagcgccgccgg
gtcgggctggagaacttcctgcttcgcgtggcatcacatcccctcctctccaatgacaag
atcctccaccacttcctcactgaggagcacggctggaaggaagtggtgtatgagacagga
ttccaggcaaaggcagattcccggctgcgagctctcagtgccaccttcagggtgagaaat
ccagataaacgcttcatggagatgaaacactacagcgatgagctgcagtctcacacatct
cagctgctccgagcaagagcaagggtggcagatcgactctacggtgtttacaaggtccac
gggaactatggaagagtcttcagtgagtggagcgccatagagaaagagatgggagatgga
ctgcaaagtgccggtcatcacatggacgcatatgccgcctcaatagatgatatcttagaa
gaggaggaacattatgccgaccaactgaaagaatatctcttctatgctgaagctctgagg
gcggtgtgcaggaaacacgagctgacccagtttgagcttgagatggcctcccaagacctc
atctccaagaagcagcagcacgaggagctagctaccgggattgtgcggacgttctctttc
aaaggcatgaccaacaagctttttggccaagaggcccccgagcagagggaggccaggctg
aagctgctggaggagctgatcacagagggggaagaaaccgtcaaggagaagacggttgag
tgccaagagcacgttgaaagggcgtgggtggatatgcggcgcttcaaggagcagaaagac
aaagatctgcgagaagctctcatcaactatgccgtcatgcaaatcagcatgtgcaaaaag
ggaatacaaatgtggagcaatgccaaagaatgtttcctcaagatgtaa
DBGET
integrated database retrieval system