Anoplopoma fimbria (sablefish): 129112438
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Entry
129112438 CDS
T09102
Symbol
nup107
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup107
KO
K14301
nuclear pore complex protein Nup107
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129112438 (nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129112438 (nup107)
03036 Chromosome and associated proteins [BR:
afb03036
]
129112438 (nup107)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129112438 (nup107)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129112438 (nup107)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
Phage_int_M
DUF8594
Motif
Other DBs
NCBI-GeneID:
129112438
NCBI-ProteinID:
XP_054480514
LinkDB
All DBs
Position
23
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AA seq
906 aa
AA seq
DB search
MDWGQNELPSPVVRDDEVTVAARRRRKKVAFPSPGSPVLSTATPARSLIRNTPASLFRQA
VTPRVPDVSSIMAPAGRTPRYIHTPRNALSSMNLDDSDWTNSMYISPVSGMENTSFFTDD
ITNLSSALLKEDDPGEAAAASLFPEFLTSFQKNSSTAVFELLEDYQTLLQDKVDVLQSVV
LRAGQNSKTAGVRWLLQQENCSWRLITSLYRDRVQLALEDDIMTDMVVPSESEKVVVEQL
FQRDAVIRQSQLVVDWLESIAKDQIGDFSDNIEYYAKNVCWENTLHALKLRRKSGASFTI
PLVTELDPDAPLRQQRPLADLDREDDARLLKNLFTLIRAGMTEEAQRLCKRCGQAWRAAT
LEGWKLYHDPNRTSVSVELQAVEGNPHRGIWKACCWRMAEEEQLNRYERAIYAGLSGNLK
PLLAVCESWEDCVWAHFRVMVDSLVEKDLMSSGMAHQEVESLPREYLEANWTMEKVFEEL
QASELKRVLEETKEHYHVIQKFVILGDLDGLLEEFSDWLSASKPLPSHLLRFMTHLLLFY
RSLGLALKEEVCVDVLKAYVTLLIQDQQTDLVASYVSQLPAELATVQYAAFLETVSQPEL
RPRCLQLATDAGLDVAAVTKLVVETVREKDETEFTHHNQTLEMGTTKEDLRKIDVIDWLL
FDPGHRAESLKQSNAIMRKFLAVQKHDAAKAVFSKVPEDSMREIYCQWSGVGQTTPLPAE
DENAIREHLCIRAYLEAHEAFTDWFSHSSSXPQKPAPAPEAKFTERVANEMREKEYQSSL
SAWSSRLDVLTEDVKERIYNVLLFVDGGWMIDNREDSELDAERSHQMAALRSLCLPRLSF
LLLSVLQNSSRHQEALRLADIISSDQHRLYQVFSKEELRRFLQKLRESSLALLDRGLDPL
GYELQP
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggactggggtcagaatgagctgccgtctccggtggttcgagacgacgaggtgacggtc
gccgcccgaaggaggaggaagaaggtggctttcccgtcacccggcagcccggtcctttcc
acggcaacaccagcacgctccctgattaggaacactcctgcttcactgttcagacaggct
gtaactcccagagttccagatgtttcctccattatggctccggcaggtcgaacgcctcga
tacatacacacacccagaaacgccctcagcagtatgaatttggatgacagtgattggacc
aacagcatgtacatctcccccgtttcgggaatggagaacaccagcttcttcacagacgac
atcaccaacctaagctccgccctgctgaaggaggacgaccctggcgaggccgcggctgcc
agtcttttcccagaattcctcacgtccttccagaaaaactcttccactgccgtgtttgag
ctgcttgaggattaccagacactcttacaggacaaggtggatgtgctgcagtctgtggtc
ctcagagcgggacagaacagtaagacagccggagtccgctggctgctgcagcaggagaac
tgctcctggagactcatcacctccctgtacagggaccgggtccagttggcgctggaagat
gacatcatgacagacatggtggttcccagtgagagtgagaaggtcgtggtggagcagctt
ttccagcgggatgccgtcatacgtcagagtcagctggtcgttgattggctggagagcatc
gccaaggatcagattggagatttttctgataatattgaatattacgccaaaaacgtctgc
tgggagaacacccttcatgctctgaagctgaggaggaagagcggcgcttccttcaccatc
cctctggtcactgagctggacccggacgctcctctccggcagcagcgtcctctggccgac
ctggacagagaggacgacgccagactgctgaagaacctgttcaccctgatcagagcgggg
atgaccgaggaggctcagaggctgtgtaagcgctgtggtcaggcctggagagcagcaact
ctggaaggctggaaactttaccacgaccccaacaggacctcagtgagtgtagagctacag
gccgtggaaggaaaccctcacagaggaatctggaaggcctgctgctggaggatggctgag
gaggagcagctaaacagatacgagagagcgatctacgccggcctcagtggaaacctcaaa
ccgctcctggcagtgtgtgaatcttgggaggactgtgtgtgggctcacttcagagtgatg
gtggactcgctggttgagaaggacctgatgtcgtcgggtatggcccaccaggaagtggag
tcactgccgcgagaatacctggaggccaattggacgatggaaaaggtgtttgaggaactt
caagcctcagagttgaagagggtgttggaggagactaaagagcattaccacgtcatccag
aagtttgtcatcttgggagacctggacggtctgttggaggagttctctgattggctgtca
gcctctaagcccctcccctcccacctgctgcgtttcatgactcacctgctgctgttttac
cgctctctgggtttggcgctgaaggaggaggtgtgtgttgatgtcctgaaggcgtacgtc
acccttctgatccaggatcagcagaccgacctcgtggcgagctacgttagccagctgccc
gctgagctcgccaccgtccagtacgccgctttcttggagacggtcagccagcccgagctg
cgtcctcgctgcctgcagctcgccaccgacgccggtctggatgttgccgcggtaaccaag
ctggtggtggagactgtgagagagaaggatgagacggagttcacacaccacaaccagacg
ctggagatgggaactacaaaggaggacctaaggaagatcgatgtcatcgattggctgctg
tttgaccccggccatcgagccgagtccctaaaacagtccaacgccatcatgaggaagttt
ctggcggtgcagaaacacgacgcagccaaggcggtgttctctaaagttccagaggattcg
atgagggagatctactgccagtggtcgggggtcggtcagaccacgcctctgcccgctgag
gacgagaacgccatcagagaacacctgtgcatcagagcctacctggaagctcacgaggcg
ttcactgactggttcagtcacagcagctcgngcccccagaagccggcaccggcccccgag
gccaaattcaccgagagagtagccaatgagatgagagaaaaggagtaccagtcctccctg
tctgcctggtcgagccgtctggacgttttaactgaagatgtgaaagaaagaatctacaac
gtgctgctgttcgtagacggaggctggatgatcgacaacagagaggactcagagctggat
gcagagcgcagccaccagatggcggcgctgcgttctctgtgtctgcctcgcctcagcttc
ctgctgctcagcgtgctgcagaactcctccagacaccaggaggcgctgcgcctcgctgac
atcatctcatcggaccagcaccgcctctaccaggttttctctaaagaggagctgaggcgg
ttcctccagaagttgagggagtcgtcgctcgctctgttggaccgaggactcgacccgctg
ggctacgagttacagccatga
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