Anoplopoma fimbria (sablefish): 129112450
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Entry
129112450 CDS
T09102
Symbol
si:dkey-159a18.1
Name
(RefSeq) sortilin isoform X1
KO
K12388
sortilin
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
129112450 (si:dkey-159a18.1)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
129112450
NCBI-ProteinID:
XP_054480529
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Position
23:6668316..6678803
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AA seq
849 aa
AA seq
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MIWRLLVLHVLLLGAESSGGRTVTFHRTQQDDSQGQTHARPIRDTSSSSGTTRAFHGPSF
TPCKTPLTPVEHKVLDDNTHETGFNGDDGSYVILTWVGDGTGVVLVLSTFSAPIDSFIEG
GSSRLYRSTDYAKSFHDISHQINNTFIREEFGVSVGPGSSVILTADIPVVDNAGGIIFTS
TDAGATFKFIQLPFHLAQPITYHFLNPDYLVALSIDGGLWLSLDFGAKWTKVHNGVHSFS
WGAGINLFFSCSRTDAVEADERGDLVLKRTTDLGKTFTTIHEDIYSFGYIGAFLFFSVME
DSRSPRVMYFSSDQGETFSRTLLPSASTEQFYSILDGDEDMLFLHVDNPGDTFFGTMYTS
DDRGILFSKSLERHLFDGQRKSDFTNITSLRGVYLTNKLDEDGRIRSVISFNRGGTWRQL
NKPENVECGEQGKKCNLHIHGEHSRNIRIVPMLALSEPTAIGLVIAHGTVGDSLSSSQHP
DVFVSSDGGYNWRGTLRGPHHYSILDSGGLIVAVEAQREGQVKNIKFSTDEGQCWKSYNF
TVQPFYFAGLASEPGTKAMNVSVWGFRPEEDGQPMWVAVTIDFQSLITRECNDEDYEEWL
AHATDGGDLNRNGCLLGVKETYRRLKKQSVCRNGRGFVVSKKQSSCLCTRGDYLCDYGYY
RHVNTSECVRQHSAANKTLELCLNGEEDELLTAGYRKVPSDRCEGGFSPQLAVQTVIRPC
GLKTSPGPPAGSSSPVTHFDTPRERLVLILVCAGAGVIVLIAIVSAIFAVRRVVYRNRSP
TYRFSNLRITDEYNGITADLESATSSNGTACQPESDDVGIITITYVIVLRYCSEFKTCHF
PILTNTNVF
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgatctggagactcttggtcctccacgtccttcttctgggagctgagagcagcgggggg
aggacggtgactttccaccggactcagcaggatgacagccagggccaaacgcacgcacgt
cccatcagggacaccagcagctcctccggcaccaccagggcctttcacgggcccagcttc
actccctgcaagaccccccttactcccgtcgagcacaaggttctggatgacaacacgcat
gagacagggtttaacggtgatgatggctcctatgttattctcacatgggtgggcgatggc
acaggggtcgtcctggtgctgtcaacatttagtgctccaatagattctttcatcgaaggc
ggctcctcacgactttatcgaagcacggattatgcaaaatccttccacgacatttcccat
cagatcaacaacaccttcataagggaggagtttggagtcagtgttggaccggggagctct
gtgattctgacagcagacattccggtggtggacaacgcaggcgggatcatcttcacctcc
actgatgccggcgcgaccttcaagttcatccagctgccctttcacctggctcagccaatc
acgtaccacttcctcaaccctgactacctcgtggcactcagcatcgatggaggtctgtgg
ctctctctggactttggcgccaagtggacaaaagttcacaatggagtgcattccttctca
tggggggctggcataaatttgttcttcagctgcagtcgaacagacgcagttgaggcagat
gagagaggggatttagtgctgaagaggacaacagatctggggaagaccttcaccacgatc
catgaggacatctacagttttggctacataggagcctttctcttcttctctgtgatggag
gattcgagatcccctcgtgtcatgtatttctcatcagaccaaggagagaccttcagtcga
actctgcttccttctgcctccactgagcagttctactccatcctggatggagatgaagat
atgctcttcttgcatgtggacaacccaggagacaccttctttggaaccatgtacacatca
gatgaccgaggcatcttgttctccaaatcactggagcgccacctgtttgacgggcagagg
aagagcgatttcaccaacataacgtcactgagaggagtctacctcactaataaactagac
gaggatggccgtataagatctgtcatttcctttaatagaggagggacgtggagacagctt
aacaaacctgagaatgtggaatgtggagagcaaggcaaaaaatgcaaccttcatattcac
ggagagcacagtcgcaacatccgcatcgttcccatgctggctctgtctgagccaactgct
atcggtctggttatcgctcatggtactgtgggggactctctctcgtcgtcccagcaccca
gatgtgtttgtctcctcagacgggggttataactggagggggacactgagaggtcctcac
cactacagcatattggactctgggggtctcattgtggccgtggaggcccagcgtgaagga
caagtcaagaatatcaagttctccacagacgagggtcagtgctggaagtcctacaacttc
acggtgcagcccttctacttcgcaggcctggcgtccgagccggggaccaaggccatgaac
gtcagcgtgtggggcttccgtcccgaggaagacggccagcccatgtgggtggccgtcacc
attgatttccagagcctcatcacaagagagtgtaatgacgaggactatgaagagtggttg
gctcatgctacagatggaggagacttgaatagaaacggctgtctcttgggtgtcaaagag
acctacaggaggctaaagaaacagtctgtgtgcagaaatggccgaggcttcgtggtgagc
aagaagcaaagctcctgcctgtgcaccagaggagactacttatgcgactacggttattat
cgtcatgtgaacacctcagagtgtgtgagacaacacagcgctgctaataaaaccttggag
ctctgtctgaatggagaggaggatgagttgctgacagcggggtaccgtaaggtccccagt
gatcggtgtgagggggggttcagtccacagctcgcagtacagacagtcatcagaccctgt
ggtttaaaaaccagccccggtccacctgccgggtcctcttctccagtcacgcactttgac
acaccgcgagagaggctggtgttgatcctggtgtgtgcaggagcaggggtcatcgtcctg
atagctatcgtttcagccatctttgccgtcagaagggtggtttacagaaacaggtcacca
acgtatcgtttctccaacctccggattacggatgaatacaacggcatcactgctgacctt
gaaagcgccaccagcagcaacggcacggcctgccagccagaatcagatgatgtaggaatt
atcactatcacttatgttatagttttaagatattgttctgagttcaaaacctgtcatttc
cccattttgactaatacaaatgtgttctaa
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