Anoplopoma fimbria (sablefish): 129112540
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Entry
129112540 CDS
T09102
Symbol
optn
Name
(RefSeq) optineurin
KO
K19946
optineurin
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04137
Mitophagy - animal
afb04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129112540 (optn)
04137 Mitophagy - animal
129112540 (optn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129112540 (optn)
Membrane trafficking [BR:
afb04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
129112540 (optn)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
129112540 (optn)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
129112540 (optn)
Xenophagy
Cargo receptors
129112540 (optn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
WipA_N
EDR4-like_1st
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
129112540
NCBI-ProteinID:
XP_054480661
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All DBs
Position
23:complement(15460511..15466811)
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AA seq
537 aa
AA seq
DB search
MASGGPLMNGDIPRSPSQSGALEEHLQQMNILIQENRDLKEALRQTNLTMKERFEGLSAW
REKQREERDFLNSRLEEARGRMEALTLQNQEQSRRVEEDRRTGGALGGLMTVSSNQSAEL
DALRAQVARLQAEKNDLVAMNSELQLKAEQDSQDDSFIEIIRVSDGGVDGVNDVCGSERS
RRPDLSMTASRLESEEMTVSQLLQSLRNETQRAERLQAELQSSAARIRELEEKKMDVEKS
TQTPQAETKEDPGKEEKAASEVENLKSQMMTLFKELQQAQSKLDEAEGMKKNLQDRCREV
EHEVVTLKAQLVEKQAVQSENDRLKLQVDSMQSQTLMEQRKAGEERNTLAQLKDAYTKLF
EDYNELKEEKKKRESLLVQKEVADGLQERLSAAEEALAAKQNHIDQMKLELFSKDEELQT
ISVFEAQAEVYSSDFYAERAAREKLHEERERLAAQLEYVKKQNSQLQEELDSLGRRSLTE
MQKRHMGGNPQGAGASLVGRGTDWQHQGNIPEHACPKCNEILPDLDSLQIHIMDCIN
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctggaggccccttgatgaacggtgacatccctcgctctcccagtcagtcgggc
gcgctggaggaacacctgcagcagatgaacatcctcatccaggagaaccgagacctgaaa
gaggccctgcgtcagaccaacctgacgatgaaggagcggttcgagggactctccgcgtgg
cgggagaagcagcgggaggagcgggactttctgaatagcaggctggaggaggctcggggc
cgcatggaggcactgaccctccaaaaccaggagcagagcaggagggtggaggaggacagg
aggacggggggagctctcggaggcttgatgacggtgtcatccaatcagagcgcagagcta
gatgccctgcgtgcccaggttgctcgcctgcaggcagagaagaacgacctggtggccatg
aactcggagctgcagctgaaggcggagcaggactcacaggatgactccttcattgagatc
atcagggtctcggatggaggcgtagacggcgtgaacgatgtgtgcggttcggagcgcagc
cgacgtccggacctgagcatgacggcgtcccggctggaaagtgaggagatgaccgtcagt
cagctcctccagtctctgaggaacgagacgcagcgggccgagcggctgcaggccgagctc
cagtcctctgctgccaggataagagagttggaggagaagaagatggatgtggagaaatca
acacagaccccccaagcagagaccaaggaggatcctgggaaagaggaaaaggcagcgtct
gaggtggagaatctgaagtctcagatgatgacgttgttcaaagagctgcagcaggcccag
agcaagctggacgaagcagaaggcatgaagaagaacctgcaggacagatgtcgggaggtg
gagcacgaagtggtcactctgaaggctcagctggtggagaagcaggccgttcagtcggag
aacgaccggctgaagctgcaggttgacagcatgcagtctcagaccctgatggagcagagg
aaggccggggaggagaggaacaccctggcccagctgaaggatgcgtacaccaagctgttt
gaagactacaatgaactcaaagaggagaagaagaagagagagtctctgctggtgcagaag
gaggtggcggacgggctgcaggagcggctgagtgccgctgaagaggccctggctgctaaa
cagaaccacatcgatcaaatgaagctggagctcttcagcaaggatgaggagctgcagacg
atatcggtgttcgaggctcaggcggaggtctactcctccgacttctacgcagagcgagcg
gcgagggagaaactccacgaagagagggagcgtctggctgctcagctggagtacgtaaag
aagcagaacagccagctgcaggaggagctggactcgctgggcaggcggtcgctgactgag
atgcagaagagacacatgggaggaaatccacagggagccggggctagtctggtcggaaga
ggtactgactggcagcatcaggggaacattcccgaacacgcctgtcccaagtgcaatgag
atcctgccggacctggactccctgcagatccacatcatggactgcatcaactag
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