Anoplopoma fimbria (sablefish): 129112554
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Entry
129112554 CDS
T09102
Symbol
pus7l
Name
(RefSeq) pseudouridylate synthase PUS7L
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afb03016
]
129112554 (pus7l)
Enzymes [BR:
afb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
129112554 (pus7l)
Transfer RNA biogenesis [BR:
afb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
129112554 (pus7l)
Prokaryotic type
129112554 (pus7l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
Xp10_P7
Motif
Other DBs
NCBI-GeneID:
129112554
NCBI-ProteinID:
XP_054480683
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All DBs
Position
23:11259680..11265642
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AA seq
683 aa
AA seq
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MKQDSDAVNIPVCYISNHEGFLGSIKNLIKDFVVTEIDITGQRVTTAAATQTPHCASPDK
NDETSAEYKWNNYSSVSQDTDVAADCGLDVTVPSPGSFDLSVILGQSVSEELEQFVLTLK
EKPTKQELSLGSFSDKHHRANVHRAVRHRFPFLMTVTIQPEIRVREDPDYRELSHLVTED
EAEDFFRFIDAKVRGSSYTFGPDDDKDHRTAVHHFLSRRFGKLVETKSFTDQGTTAISVR
LREQGRPKKRTAEERKEEEVYTAFTLRKENLETLEAISYMAAALGVLPSDFTYAGIKDKR
AITYQSMVVKKVSTQRLKEKTAEFEKRGMRLSQIRSVSEPLRLGRLQGNHFDLVVRGLRP
HGASDAHSSGADNNTRLAALVNEALENVKARGFVNYYGPQRFGSVQSVQSDRVGLALLKE
DMVSAVRLFFTPEDGSDPQNHAKRHFLQTDNAKESLALMPLSKARERLMLRALNRYGTGP
DGCTQAWLSLPHSMRVFYPHAYCSRVWNDAVAHRLTTLGHIARRGDLVWMQEDTAETSTA
QIHVVTDQEEHEGVYTLGDVLLPMPGNTVKYPENAMATWFKERLAKDGLDDCRFRVSSLK
LNLPGCYRPLLASPSNLSYQLQRAACGEGGGEESGNSSRNSDRQLNGTKAEGKQGSLTLT
LNFDLDSSCYATICLREIMKCDP
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaggacagtgatgctgtgaacatccctgtgtgctacatatcaaaccatgaaggt
ttcctcggaagcatcaaaaacttaatcaaagactttgtggtgactgagatagacatcact
ggacagcgtgttaccacagcagcagccacacagacaccgcactgtgcctccccagataaa
aacgatgaaaccagtgcagagtacaagtggaataattattcctcggtctcacaggacact
gatgtggctgctgattgtgggctagatgtcaccgtacctagtccaggcagctttgattta
agtgtgattttaggccagtcggtcagcgaagagctggagcagtttgtgttgactctcaaa
gaaaagccaaccaagcaggagctatcgcttggatctttttctgacaaacaccacagagct
aacgtccaccgggccgtcagacaccgcttcccctttctcatgactgtcactattcagcct
gagatcagggtgagggaagacccagactacagagagctctcccatctggttacggaggat
gaggcagaggacttcttcaggttcatagacgccaaagtgcgaggctcatcctataccttt
ggaccagacgacgataaggatcacaggactgcagtccatcacttcctcagccgaaggttt
ggcaaactggtggagacaaagagcttcaccgaccaggggacgacagcaatctcggttagg
ctgagagagcaagggaggccaaagaaaagaacagcagaggaacgtaaagaagaagaagtt
tacactgctttcactttgcgtaaggagaacctggagactctggaggctatcagctacatg
gcagccgctctcggggtcctgccatcagatttcacctacgctgggatcaaggataagaga
gccatcacctaccagtccatggtggtcaagaaggtctcaactcaaaggttgaaagagaag
acagctgagttcgagaagagagggatgcgtctgtcccagatccgctccgtcagcgagcct
ctgaggctaggacgactgcaggggaaccactttgacctggtggtccgcggcctgaggccc
cacggggccagtgacgcacactcctctggtgcagacaacaacactcgcctggcagcgctg
gttaacgaagcgttggaaaatgtcaaggccagaggttttgtcaattactatggaccacag
aggtttgggagcgtgcagagcgttcagtctgaccgcgtaggcctggctttgctcaaagag
gacatggtgagcgctgtgcgtctcttcttcactccagaagacggcagtgatcctcaaaac
cacgctaagagacacttcctacaaaccgataacgcgaaggagtctttggcgttgatgcca
ttgtcgaaagctagggagcgtctgatgctccgggccctgaaccgctacggtacaggtccg
gacggttgtacccaagcctggctcagtttgccccacagcatgagagtcttctacccacac
gcctactgtagcagagtgtggaatgatgcagtggcacacaggctgactactctgggccac
attgccagacgaggagacctggtgtggatgcaggaagacactgcagaaaccagcacggct
cagatccatgtggtaacagaccaagaggaacacgaaggagtttacacactgggagacgtg
ttactaccgatgccaggaaacactgttaagtatccagaaaacgccatggcgacttggttc
aaggagaggctggccaaagatggactggacgactgtcgcttcagagtcagcagcctcaaa
ctaaacctgcctggctgctaccgccccctgctggcatcaccaagcaacctcagctaccag
ctgcagagggcagcctgtggtgagggaggaggagaggagtcgggaaatagcagtagaaat
agtgacaggcagctcaatggcactaaagcagaagggaagcagggctcgctcactctcacc
ttaaacttcgacctggactcctcctgctatgctactatctgcctcagagagatcatgaag
tgtgacccctag
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