KEGG   Anoplopoma fimbria (sablefish): 129112824
Entry
129112824         CDS       T09102                                 
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
  KO
K05636  laminin, beta 1
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04510  Focal adhesion
afb04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:afb00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    129112824 (lamb1b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    129112824 (lamb1b)
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 F5_F8_type_C Lipase_GDSL
Other DBs
NCBI-GeneID: 129112824
NCBI-ProteinID: XP_054481032
LinkDB
Position
23:4021031..4050633
AA seq 1781 aa
MSLIIPFITILALWSPVSLQQWPDFPDVCTEGSCYPATGDLLIGRAHKLSVTSTCGLKKP
ERFCIVGHLEEEKKCFVCDSRRMFDEDSNQVSHTIDNLVTTFAHNRLKTWWQSENGVENV
TIQLDLEAEFHFTHLIMTFKTFRPAAMVIERSMDFGKTWQVYRYFAYDCKSSFPDVASGP
MVKVDETVCDSRYSDIEPSTEGEVIFRVLDPVFKIEDPYSLKIQNMLKITNLRVKFLMLH
TLGDNLLDSREEVTEKYYYSLYDMVVRGNCFCYGHASECAPIDGEPSTAEGMVHGRCVCN
HNTEGLNCERCQDFYHDLPWRPAEGRNSHACKMCECNQHSTSCHFDLAMYVTTGNMSGGV
CDDCRHNTVGRQCEQCAPFYFQHPNRDLRDPNVCEACNCDPAGSLQGGLCDSHTNVVAGL
ISGQCRCKANVEGERCDHCRQGHHGLGQGPDGCLPCTCNLLGTLPGGNCDSETGKCFCKR
LVDGHSCDECLPQHWGLSNDMDGCRSCDCDQGGAVNNNCDPHSGQCVCREHMFGRRCDRV
ESGFYFITLDHYTYEAEDAKHGPGVTVVPRPYPLDRSPTWTGMGFVNVPEGAYLEFTINN
VPESMDYDVLIRYEPQLPEQWEQVHMQVQRPVFNPPNYSGHCGNSLQSGDQQSISLPPGS
RHVLLVRPVCFEKGLNYTIRLTLPLYSSVSDVQSPYTLIDSLVLIPRIRELDMFHGIDGE
GAWDTFQRYRCLESSQSVVKSPLTDICNDYIFSVSALLHQGAMACQCDPQGALSAMCEPS
GGQCQCRPNIVGRNCEHCAPATFLFSPAGCRPCGCDPLGSVSAFCHEATGQCECVPGAMG
RQCSHCLPGFWGFPQCRVCHCNGHSEYCHPQTGECQGCRDFTTGHHCERCLNGYHGDPEL
GSGGHCRPCMCPDGPRSGRQFSDNCYLLDNSNQLVCVCSPGYKGARCDECAPGYFGNPLV
PGGSCLPCQCNSNIDMHDPGSCDAQTGACLKCLYHTEGYGCQDCKQGYYGNAGTQRCWKC
MCNSVGTSPRACSSPDECQCDQRSGQCPCLPNVVGQNCDSCATDTWNITSGTGCQRCDCD
PVHSFGSSCDEITGQCLCRPGFGGKTCRECREFFWGDPEVKCHACDCDSRGISSEQCHRA
TGQCTCVEGVSGPRCDICARGYQGEFPTCEPCHQCFAVWDTVVGELTNQTQRLEAQVTQL
QISGVTAPYKDLVSSLERNAKAVREIVENNPAAVKLEQIQDLLHQITGVMSYLNGQLNTT
EETLNDLHSDANATDANLDTLTDEANQLELSVQELKQQVYNAKNANIQGAMDTITDAHRQ
SMMAELHANASTSNPGNTVEESATVRKATEDKLSSSQKEFDRKHQRNSQKLDKLSTELDT
FDLSPLSEKTCGGAAEGDACSGSLCGGLGCVGEDGRPQCGGEGCEGLVTTSQTALKSGKD
LDQEILAASQEVDKLSRMVWEANNRANKAKVNALEVLVKSNRSKERVEQSNQQLRNLIKE
IRDLLNNEKADVSVIEAVANEVLALEMPTSTEKLQELTKEIREKVDTLTSVETILSQSAE
DILAAEMLLIQAKAASEEASTVKESADVVKAALDETERAQSVAMDAIQLAKNNTKGTLDL
LVSVESETAMSELKLGNTTGRLVQLEREVGLLRQNNLVMNRLVETSDQMTDQARLNAEEA
QQEFDMEVKDKFVEVEDLVEDKGESVLQAKRRADELQKEAKELLAQSSSKLQRLTELEGS
YEANQLTLEAKAAELVELEQTVRQILDEINYKVTMYSTCLG
NT seq 5346 nt   +upstreamnt  +downstreamnt
atgtcgctcataatcccctttataacaattttggccctgtggagccccgtcagcctgcag
caatggcctgacttcccggatgtctgcacagagggcagctgctacccggccacaggtgac
ctgctgatcggccgagcccacaagctctctgtcacctccacctgcgggctcaagaagccg
gagcgcttctgcatcgtcggacatctggaggaggagaagaaatgtttcgtgtgcgactcc
aggcggatgttcgacgaggacagcaaccaggtcagccacaccatcgacaacctggtcacc
accttcgcccacaaccgcctcaagacctggtggcagtcggagaacggtgttgagaatgtg
accatccagctggacctggaggccgagtttcacttcacgcaccttatcatgaccttcaag
acgtttcggccggctgccatggtgatcgagcggtccatggactttgggaaaacgtggcag
gtttatcgttacttcgcctacgactgcaagtcgtccttccccgacgtggcctccgggccg
atggtcaaagtggacgaaaccgtctgtgactcccgatactcggatatcgaaccgtccaca
gagggagaagtgatatttcgggttctggacccggtctttaagattgaggacccctacagc
ctgaagatacagaacatgctgaagatcaccaacctccgggtgaagttcctgatgctccac
acgttgggcgacaacctgctcgactctcgcgaggaggtgacggagaagtactattactcc
ctctacgacatggttgtccgcggcaactgcttctgctacggtcacgcctccgagtgcgcc
ccgatcgacggagagccgtccacagctgagggcatggtccatggccgctgtgtgtgtaat
cacaacaccgagggactaaactgtgagcgctgtcaggacttttaccatgatctgccttgg
agacccgctgagggccgaaacagccacgcctgcaagatgtgtgagtgtaaccagcactcc
acatcctgccacttcgacctggccatgtacgtgacgacgggcaacatgagcggaggcgtg
tgtgacgactgtcgacacaacacggtgggccgacagtgcgagcagtgtgcgcccttctac
ttccagcacccgaaccgcgacctgagggaccccaacgtctgcgaagcgtgtaactgtgat
ccggccggctctctgcagggcggactgtgtgactcgcacaccaatgtggtagccggtctg
atctcaggccagtgtcgatgcaaagccaatgtggagggggagcgctgtgaccactgcaga
cagggacaccacggactgggacagggccctgacggctgcctgccttgtacctgtaacctg
ctgggcactttacctggagggaactgtgattcggaaacaggaaagtgcttctgcaaacgc
ctcgttgacggacatagctgcgatgagtgtctgcctcagcactggggtctgtccaatgac
atggacggctgcagatcatgtgactgtgatcagggcggggccgtcaacaataactgtgac
cctcactcaggacagtgtgtgtgcagggagcacatgtttggacgacgctgcgatcgggtc
gagtccggcttctacttcatcactctggatcactacacctacgaggcagaggatgccaag
catggacctggtgtgacagtggtaccgaggccttatcctttggatcgcagtcctacgtgg
accggtatgggctttgttaatgttccagaaggagcctacttagagttcaccatcaacaac
gtcccagagtccatggactatgacgtccttattcgctatgagccgcagctgccagagcag
tgggagcaggttcacatgcaagtgcagcgtcccgtcttcaaccctccaaactactctggt
cactgcggcaactccctccagagtggagaccagcagtccatctctcttccacctggatcc
agacatgtgttgctggtgaggccggtgtgtttcgagaaaggactgaactacacgatccgt
ctcactctgcctctctactcgtcagtcagtgacgtccagagcccctacacactcatcgac
tctttggtcctgataccccggatcagggagctggacatgttccatgggattgatggtgaa
ggagcgtgggatacgttccagcgctaccggtgtctggagagcagccagagtgtcgtcaaa
agccccctgactgacatctgcaacgactacatcttcagcgtctctgctctgctgcaccaa
ggagccatggcatgccagtgtgaccctcagggtgctctcagcgccatgtgtgagcccagt
ggaggtcagtgccagtgtcgacccaacattgtcggcaggaactgtgaacactgtgccccc
gctacgtttctgttcagcccggccggctgcagaccttgcggttgcgaccctctgggctcg
gtcagcgccttctgccacgaggcgacaggccagtgtgagtgtgtcccaggggccatgggg
cgccagtgttcccactgcctgccaggcttctggggcttcccccagtgcagagtgtgccac
tgcaacggccacagcgagtactgccaccctcagactggagagtgtcagggctgcagagac
ttcaccaccggacaccactgcgagaggtgtctaaacggttaccatggtgacccggagctt
ggatcaggtggccactgtcgcccctgtatgtgccctgatggtccgcgcagtggacgccag
ttttctgacaactgttaccttctggataattcaaaccagctggtgtgtgtgtgcagccct
ggctacaaaggtgccaggtgtgacgagtgtgcccccggttattttgggaaccctctggtg
cccggtgggagctgcctgccctgccagtgtaacagcaacatcgacatgcacgacccgggg
tcctgtgacgctcagacgggcgcctgtctcaaatgcctgtaccacactgagggctacggt
tgtcaggactgcaaacagggttactacggcaatgctggcactcagagatgctggaagtgc
atgtgtaactcggtgggtacatcacctcgggcctgttcgtcccctgatgagtgtcagtgt
gatcagcgtagcggtcagtgtccctgtctgcccaacgtggtcggccagaactgcgactcc
tgtgccaccgacacctggaacatcaccagcgggacgggctgccagcgctgcgactgcgac
cccgtccactccttcggatcctcctgcgatgagatcacaggacagtgtttgtgcagaccc
ggctttggtggaaagacttgtcgggagtgcagagagttcttttggggggatccagaggtc
aaatgtcatgcttgtgactgcgactctcggggaatctccagcgagcagtgccaccgtgcg
accggccagtgtacctgtgtggagggcgtgtccggaccacggtgtgacatttgcgccagg
ggctaccagggtgagttccccacctgtgaaccctgtcaccagtgctttgctgtctgggac
acagtggtcggcgagctgaccaatcaaactcagcgccttgaggcccaagtaacacagctc
cagatcagtggggtgacggcgccatataaagacctggtcagcagcctggagaggaacgcc
aaagccgtcagagaaatagtggagaacaaccctgcagcagtgaagctggagcagatacag
gatctgctgcatcagattaccggtgtgatgtcctacctaaacggacagctgaacactaca
gaggagaccttgaacgatctccacagtgacgccaacgccactgatgcgaacttagatacg
ctgacagatgaggccaaccagctggagctgagtgtccaggagctgaaacagcaggtgtac
aacgccaagaacgccaacatccagggtgccatggacaccattacagatgcacacaggcag
tctatgatggctgagctccacgccaacgcgtccaccagtaatcctggaaacacagtggag
gaatcagccacagtacggaaagcaacggaggacaaactgagcagctctcagaaggagttt
gatcgcaagcaccaaagaaactcgcagaagctggacaagctgtccactgagctggataca
tttgacctgtcaccactaagcgagaagacatgtggaggtgcagctgaaggggacgcctgc
tccggctccctctgcggtggtttgggttgcgtcggcgaggacggaaggcctcaatgtggc
ggagaaggatgtgaaggcctcgtcaccacttcccaaactgcactcaaatccggcaaagac
ctggaccaggagatcctcgcagcgagtcaggaagtggacaagctctccaggatggtgtgg
gaagccaacaaccgcgccaacaaggccaaggtgaacgctctggaggttctggtcaaatcc
aaccggagcaaagagagagtggagcagagcaaccagcagctccgtaacctcatcaaggag
atacgagacctgctcaacaatgaaaaggcagatgtttcggtgattgaggcggtggccaac
gaggtgttggctctggagatgccgacctcgaccgaaaagctgcaggagctgacgaaggag
atcagggagaaggtcgacactctgaccagcgtggagacgattctcagtcagagcgctgag
gacatcctggctgcagagatgctgctgatacaggccaaggctgccagtgaggaggcgtct
accgttaaggagtcggcagatgtggtgaaggcggctctggatgagactgagcgtgctcag
agtgtcgccatggacgccatccaactggccaaaaacaacacgaagggaacactggacctg
ctggtctctgtggagtcagagacggccatgtcggagctgaagctcggtaacaccacgggt
cgtctggttcagctggagagggaggtcggcctgctgagacagaacaacctggtgatgaac
cgcctggtggagacgtccgaccagatgaccgaccaggccagactgaacgcagaggaggcc
cagcaggagtttgacatggaggtaaaagacaaatttgtggaagtggaggacctggtggag
gataaaggggagtcagtgctgcaggcgaagaggagagcagacgagctgcagaaggaagcc
aaagagctgctcgctcagagcagcagcaagctgcagagactcacagagttggaaggttcc
tacgaggccaaccagctcaccctggaggccaaagctgcagagctcgtggagttggagcaa
accgtccgccagatcctggatgagatcaactacaaagtgacgatgtacagcacctgtctg
ggatga

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