Anoplopoma fimbria (sablefish): 129113034
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Entry
129113034 CDS
T09102
Symbol
stag2a
Name
(RefSeq) cohesin subunit SA-2a isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129113034 (stag2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129113034 (stag2a)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
129113034 (stag2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
DUF3835
Motif
Other DBs
NCBI-GeneID:
129113034
NCBI-ProteinID:
XP_054481114
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Position
24:complement(16760764..16778128)
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AA seq
1276 aa
AA seq
DB search
MIAAQDLHTEFQFAPEAESQLSSDTDFEDPDGKHAKTGKGMAAKKGKKALGDKAKGGAAG
RTPGVGRVNGHYQENGKENMTLFEVVKIGKSATQSVVDDWIEAYKHDRDHALLDLINFFI
QCSGCKGAVSGEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMSGPQWKKFRISFGDFIAVL
VRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMD
NTQRQYESERNKVVAKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIA
EIRAICIEEIGVWMKLYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLNALQGLFYSRELGA
RLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSDEVLTAEDCESVYHLVYSAHR
PIAVSAGEFLFKKLFSHRGPEEEGLPRRGRQSLNGSLIKTTVFFFLESELHEHGAYLVDS
LWDCGSELLKDWETMISLLLDEPIPGEEALTDRQETALVELMICAIRQACECHPPVGRGT
GKRVLTAKEKKTQLDDRTRITEMFAVALPLLLAKYCVDIDKVTNLLQIPKYFDLDIYTTG
RLEKHLDALLRQIWEVQDKHTDTEVLEVCSTTYHSLCNEEFTIFNRVDIARSQLLDELVD
KFNRLLEDFLQEGEEPDEDDAYQVLSTLKKISAFHNAHDLSKWDLFTSNYRLLNTGLQNG
DMPEQIVIHSMQCTHYIILWHLAKVSDGSSLKGDMVTLRKQMRAFCLMCQRYLNSINNAV
KEQAFTILCDLLLIFSHQIMSSGREQLEPLVYTPDSSLQAELLNFILDHVFIDQDDDTNS
TDGQQDDEASKIEALHKRRNLLAAYCKLIIYNVVEMNTGADIFKQYMRFYNDYGDIIKET
LSKTRQIDKVQCAKTLVLSLQMLFNEMLSELGFNVDRSTSAFCGIKELARRFSLTFGLDQ
LKTREAIAMLHKDGIEFAFKEPSPQGQGSPPLNLAFLDILSEFSSKLIRQDKRTVHVYLE
RFMTVQMALQREDCWLPLISYRNSLQVGGDDDTMSVISGISSRGSTRSKKSKPAIASKRK
LPEAEENSCSSSDAIWMNREQNVQTPVMMHSPHLTSTVLRDPKKMRPEDSYTAAFTMPTE
QLPHQPVPLQQQPHHHHQTAIDYNTQVTWMLTQRQQAEARQQQERVSMHYAKMRNHMQQA
IRRGSGLMEDDEEPIVEDVMMSSEGRLEDINEGMDFDTMDIDLPASKNRRERTELKPDYF
DPSSIMDDSVLNVSMF
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagcgcaggatttgcacacagagtttcaatttgctccagaggcagaatctcag
ctgtcttctgatactgactttgaggatcctgatggcaaacatgcaaagacaggaaagggc
atggcagccaagaaagggaagaaggcgctcggggacaaggccaaaggtggggcagcagga
aggacccccggtgttggcagggtgaatggccattatcaggagaacgggaaggagaacatg
accctgttcgaagtggttaaaattgggaagagtgccacacagtccgttgttgatgactgg
attgaggcatacaaacatgacagggaccatgctctcctggacttaatcaacttcttcatt
cagtgctccggctgtaaaggtgctgtgagtggcgagatgttcagacatatgcagaactcc
gaaatcatccgaaaaatgacagaggagtttgatgaggacagcggtgactatccattaact
atgtcaggaccacagtggaagaaattccggatcagcttcggtgacttcattgcagttctg
gttcgtcagtgtcagtacagcatcatctacgacgagtatatgatggacacagtcatctcg
ctgctcaccggcctgtctgactcacaggtcagggcctttagacatacaagcacactagca
gccatgaagttgatgacggccttggtgaatgttgctctcaacctaagcatcaacatggac
aacacgcagagacagtacgagtcagagaggaacaaggttgttgcaaaaagggccaatgat
aggctggagctgctgttacagaagcgtaaagagcttcaagaaaatcaagatgaaattgaa
aacatgatgaatgcaattttcaaaggagtgtttgttcacagatatcgggatgccattgct
gaaatccgagctatttgtattgaggagattggagtgtggatgaagttgtacagtgacgcc
ttcctcaatgacagctacctgaagtatgtgggctggacaatgcatgacaagcaaggtgag
gtgcgactgaagtgtctgaatgccctacaagggctgttctacagcagagagcttggcgca
cgactggagctcttcacaagtcgcttcaaggaccgcattgtgtctatgactctggacaag
gaatatgatgttgcagtacaagccattaaacttctgacacttgtcttgcagagtagtgat
gaggtcctgacagcagaggactgtgagagtgtgtatcatctggtgtactcagcacatcga
cccatcgctgtttcagcaggagaatttctgtttaagaagctctttagccatcgaggtcct
gaggaggagggattacccaggaggggcaggcagagcctcaatggcagtcttatcaagact
actgtcttcttcttcttggagagcgagctccatgaacatggggcctacttggtggatagc
ttgtgggattgtgggtcagagctgctgaaggactgggagactatgatcagcctgctgctg
gatgagcccataccaggagaggaggcactgactgatcgccaggagacggctctggttgag
ttgatgatctgtgccatccgacaggcttgtgaatgccaccctccagtcggcagaggcaca
ggaaaaagggtcctgactgcaaaagagaaaaaaacacagctggatgatcggacacggatc
acagagatgtttgcagttgcgttgcctctgttattggcaaagtactgcgttgatattgat
aaggtgaccaatttgctacaaataccaaagtactttgatcttgacatctacacaacaggc
cggttagaaaagcatttggatgccttgttgcggcaaatctgggaggtccaggataagcac
acagacactgaggtcctggaggtctgctctaccacctaccactccctctgcaacgaagag
ttcaccatattcaaccgggtggacatcgctcgctctcagcttctcgatgagcttgtagac
aagttcaatcgactcctggaggacttcctgcaagagggtgaagaaccagatgaagatgat
gcctaccaggttctatctacactcaagaagatcagcgctttccacaatgcacatgacctc
tctaagtgggatctcttcaccagcaactacaggctacttaacacaggtctgcagaacggg
gacatgcctgagcagattgtgattcactcaatgcagtgcacacattacatcatcctgtgg
catctagcgaaggtttcagatggcagttcattaaagggtgatatggtgaccttgagaaag
caaatgagagctttctgcttaatgtgtcagcgttacttaaacagcatcaacaacgcagtt
aaagaacaggccttcaccatactatgtgatctgctattgatcttcagtcaccaaattatg
tcttcaggccgggaacaactggagcctctggtctatacaccagactcctctttgcaggca
gagctgctcaacttcattctggatcatgtgttcattgatcaggatgatgacaccaacagc
acagacggacagcaagatgatgaagctagtaaaattgaggctctgcacaagcgaagaaac
cttttagctgcctattgtaaattaatcatttacaatgtggtggaaatgaacaccggagca
gatatatttaaacagtatatgaggttttacaatgactacggagatatcatcaaggaaacg
ttgagtaaaacaagacaaatcgacaaagtgcaatgtgcaaagacactcgtcttgagcctg
caaatgttattcaatgagatgttgtctgaacttggctttaatgtcgaccgctcaacgtca
gccttctgtggcataaaagagcttgcacgacgcttctcattgacttttggcttggatcag
ttgaagaccagggaggctattgccatgttacataaggatgggattgagtttgcttttaag
gagcctagtccccaaggacagggtagtccaccactcaatctagcctttttggatatcctg
agcgagttttccagcaaactgattcgtcaggacaagagaacagtacacgtgtacctggag
cgattcatgacggttcagatggccctgcagcgagaggactgctggctgcccctcatctcc
tacaggaactccttgcaggtgggaggggacgatgacaccatgtctgtcattagtgggatc
agcagtcgagggtccaccaggagtaagaaatccaagccagccattgctagcaaaaggaaa
ttacctgaagcagaagagaacagctgcagcagtagtgatgccatttggatgaaccgtgag
cagaacgtgcagacgccagtgatgatgcactcgccccacctcacctctactgtactgagg
gatccaaagaagatgaggccagaggacagctacactgccgcgttcaccatgccaacagag
cagcttccccatcagcctgtgcctctccagcagcagccgcaccatcaccaccagactgcc
attgattacaatacccaggttacttggatgttgacacagagacaacaagctgaggcccgt
cagcagcaagagcgagtaagcatgcactatgccaagatgaggaaccacatgcagcaagca
attcgtcgaggctcaggactcatggaggacgatgaggagccaatagtggaggatgtgatg
atgtcatcagagggccgcttggaggacatcaatgagggcatggattttgacacaatggac
attgatttgccagcatcaaagaatcgcagagaaagaactgaactgaaaccggactacttt
gatccatcttccatcatggatgattcggttctcaatgtttcaatgttctaa
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