Anoplopoma fimbria (sablefish): 129113042
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Entry
129113042 CDS
T09102
Symbol
synj1
Name
(RefSeq) LOW QUALITY PROTEIN: synaptojanin-1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00562
Inositol phosphate metabolism
afb01100
Metabolic pathways
afb04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
129113042 (synj1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
129113042 (synj1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129113042 (synj1)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
129113042 (synj1)
Membrane trafficking [BR:
afb04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
129113042 (synj1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
129113042
NCBI-ProteinID:
XP_054481127
LinkDB
All DBs
Position
24:complement(13094061..13119314)
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AA seq
1664 aa
AA seq
DB search
MAFSKGYRIYHKLDPPPYSVIVETRSREECLMFESGAVAVLSAAEKEAIKNSYAKILDAY
GILGVLRLNLGDSMLHSLVVVTGCSSVGKVQDSEVFRVTQTDFISLKNDPGDEDRIAEVR
KVLNSGHFYFAWSASGVSMDLSLNAHRRILEDTTDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAGHKQAKACIFSRLSSERAGTRFNVRGTNDDGQVANFVETEQVIFLD
DNVSSFIQIRGSIPLFWEQPGIQVGSHRVKLSRGFEANAPAFERHFTTLRKLYGKQVIIN
LLGSKEGEHMLSKAFQSHLKASEHVSAVKMVNFDYHQNVKGGKADKLHSVLKPYLSKFIE
ECGFFYYSGEMGIARTQGGTLRTNCLDCLDRTNSVQAFFALEMLPKQLEEMSLTEKPQLV
ARFQEVFRTMWSANGDSVSKIYAGTGALDGKAKAGKLKDGARSVTRTIQNNFFDTSKQEA
IDILRLGSTLNSDLADKARALLTTSSLYASPRVLLGMCQNHHKYTRPKQIRVCVGTWNVN
GGKQFRSIAFRNQTLNDWLLDAPKKAGHPEFQDSKANPIDIFAIGFEEMVELNAGNIVSA
STTNQKLWAAELQKNISRDHKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDVVKTGMG
GATGNKGGVAIRLLFHTTSICFVCSHFAAGQSQVKERNDDYSEITRRLTFPMGRLLYSHD
YVFWCGDFNYRISLPNEEVKELIKQQNWDALTSGDQLLDQKNAGLVFRGFIEGKLDFAPT
YKYDLFSEDYDTSEKCRTPAWTDRILWKRRKWNFNKSAEEMNVVGAASTSGENDDDPDNP
WSPGTLKYYGRAELKTSDHRPVVSIIDVDILEVDPEERHQVYKEVIALQGPPDGTILVSL
CASGPDDYFDDALIDELLDKFSNFGEVILIRFVEEKMWLTFLEGYSALAALSLCASTVLG
HVIDIRLKSPGWIKSLEEEMSVERICGSIPTSASSTLLAEDTDMGDDDYDMEGDVDDEVE
EILPQHLQPGAGSAPGSSPLPSPEXSPCPSPTHGEPVAPGRSSHGGQPSRPSQGPPVDFQ
PGAPTSQEPKRPPPPRPHXPPARPAPPQRPPPPSARGQVAVGAPGPGGVPRPNIPPRAGV
ISMPPQSRQPPPSHPGAPRPIPEVHPGAPRPIPDTHPGAPRPVASGQVKPTDLPLGPPPS
GPPPTEPPAARPQVPSPMQPPMQPPMQPTMQPHMHPPMHPPMQTPMQPSMQTPMQPQPAA
PTVQSQLPAPMQPTLQAPLLPQQAARVGPPPAAAAVGLPQGLSSPKAPPRSRSSHTLPPD
AAKSETAPAAQTNGLNGIQREAQWKPDHFDTLASEFLSSSSSSWHTTQSLTRGSSLRAPP
SVPASTSASSSTLPSSFSLQPSALSDLQALDSSSSSSLSTPSPLASSLLPPPPVPSRSRS
QETLRASPGPLPTDPLPARPSSTNPFTGPLPHQQPRSLTPDFSVQRPAPTPNIQRTMSAF
TQPLIPTLAPTAAPTAAPTFQLQRTASLFGPSSTFPSTPAPLLPLAPSPIPSLPLASASS
IPPVLAPHRQPPPPGGKPTQRWVTFDDDLGFQPPTKTPQAPLLTSSSLVSQSQPSSSVFD
SEPDWLSSVPSVFPTLPPPVPGRTVNSNPKPPEGPSDDCFFRRE
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atggccttcagcaagggttaccgcatttaccacaagctggacccacccccctacagtgtc
atagtggaaactaggagccgggaagaatgcctcatgtttgaatctggggctgttgccgtc
ctgtcggcagcagagaaggaggccattaaaaactcgtatgccaagatccttgatgcctat
ggtatcctgggagtcctccgcctaaacctgggtgactccatgctccacagtctggtggtt
gtgacaggatgcagctctgtggggaaggtgcaggattctgaggttttcagggtcacacag
acagattttatatcgctgaagaatgatccaggagatgaggaccggatcgctgaagtgcga
aaggtcctgaactcaggacacttctactttgcctggtctgcctctggtgtcagcatggac
ttgagtctcaatgcacatcgcaggatcctagaggacactacggataaccgcttcttttgg
aaccaatctctgcacctgcacctgaaacactacggagtaaactgtgatgattggctgttg
aggctgatgtgtggcggtgtggagatcaggacaatctatgccgggcacaaacaggccaag
gcctgcatcttctcccgcctcagctcagagcgggctggcacacgattcaacgtccgagga
acaaatgacgacgggcaggtggccaactttgtggagactgaacaggttattttcctggat
gacaatgtctcatcattcattcagatccgtgggtccattcctcttttctgggaacagcca
ggaatccaggtcggctctcatcgtgtcaaactctcaaggggatttgaggcaaacgcacca
gcattcgaaagacactttactacactgcggaagctgtatggaaaacaggtgatcatcaac
ctgcttgggagtaaggaaggggaacacatgctcagcaaagcttttcagagtcacctgaag
gcatcagagcatgtatcagcagtgaagatggtgaactttgactaccatcaaaatgtgaag
gggggcaaagcagacaaactccacagtgtcctcaaaccctacctcagcaagttcatagaa
gagtgtgggttcttctactactctggagagatgggcatcgccaggactcagggtgggacc
cttaggaccaactgcctggactgtttggacagaaccaacagtgtccaggcattctttgcc
cttgagatgctgccaaagcagctggaggaaatgagtctgacagagaaaccccagctggtg
gcccggttccaggaggtctttaggaccatgtggtctgccaacggagactctgtcagtaag
atctacgcgggtactggtgccctggatggcaaggccaaggcgggaaagcttaaagatggc
gctcgttctgtgacgaggaccatccagaacaacttctttgacacttccaagcaggaggct
atagacatcctgaggctgggctccactctcaacagtgatttggcagataaggctcgggcc
ttgctcaccacttccagtctttatgcctccccaagagttttgctgggaatgtgtcagaac
caccataaatacacgaggcccaagcagatccgggtgtgcgtcggcacctggaatgtcaac
gggggtaaacagtttcgcagcattgctttccgcaaccagacgctcaacgactggctgttg
gatgccccaaagaaggcagggcatcctgagttccaggacagcaaagcaaaccccattgat
atctttgccatcggttttgaggaaatggttgaactaaatgctggcaatattgtcagtgcg
agcactacaaaccagaaactatgggcagctgagctgcaaaaaaacatatcgcgggaccac
aagtatgtgctgcttgcttcggagcagctggtgggagtttgtctgtttgttttcatccgc
ccacagcatgcacccttcatcagggatgttgctgtagatgtagttaaaactgggatgggc
ggggctacaggcaataaaggaggtgtggccatccgcctgctcttccatacaaccagcatc
tgcttcgtctgctcccactttgctgctggccagtcacaggtcaaggagaggaatgacgac
tacagtgagatcacacgcagactcaccttccccatgggtcgtctgctgtactcgcatgac
tacgttttctggtgtggagacttcaactatcgaatcagcctgcccaacgaggaagtgaaa
gagctaatcaaacagcaaaactgggatgccttgacatctggtgaccaattgttggaccag
aagaatgcgggtttggtgttccgaggttttatcgaggggaagttggattttgctcccacc
tacaagtatgacctcttctcagaagattatgacaccagtgagaagtgccgcacacctgcc
tggactgaccgcattctctggaagaggaggaagtggaactttaataagtcagctgaggag
atgaatgttgtaggagcagcttctacatctggggagaatgacgacgatccagataacccc
tggagcccaggcactctgaagtactatggcagagctgagcttaagacctcagaccacagg
cccgtggtgtcaataatagacgtggacatcctggaggtcgacccggaggagcgacaccag
gtctacaaagaagtcatcgccctgcaggggcctccagacggcaccatcctggtgtccctc
tgcgcctccggccctgacgactactttgacgacgctctcatagacgagctgctggacaag
ttttctaattttggagaggtcattctcatcaggtttgttgaggagaagatgtggttgact
ttcctggaaggttactctgctcttgctgctctttctctctgcgcttccactgtccttggc
catgtgattgacatccgtctgaagagtccaggctggatcaagagtctggaggaggagatg
agtgtggagagaatctgtggaagcatccccacctcggccagctccaccctgcttgctgag
gacacggacatgggcgatgatgactatgatatggaaggtgatgtggacgatgaggtggag
gagatccttccccagcaccttcagcccggagcaggctcagcccccggatcctcccctctc
ccctcccccgagngtagtccctgtccctcccccacccacggagaacctgtcgcccctggc
aggtctagtcacggaggacaaccctcccgaccatcacaagggcctcccgttgactttcag
cctggtgcccccacatctcaagagcccaaacgcccgcctccccctcgtccccacngcccc
ccagccagaccagcacctcctcaacgcccaccaccaccttcagctcgaggccaggtagca
gttggagctcctggacctgggggtgttcccagacccaatatccctcctcgagcaggggta
atcagtatgccccctcagtctcgccaaccacctccctctcaccctggagcacccagacca
atcccagaggtgcatcctggggcccctcggcccatcccagacacccaccccggagcccca
cgacctgtggccagtggccaggtcaaaccgactgacctgcctctgggcccccctccatca
ggtcctcctcctacggagccccctgcagcaagaccccaagtcccatcacccatgcagcca
cccatgcagccacccatgcagccaaccatgcagccacacatgcacccacccatgcaccca
cccatgcagacacccatgcagccatccatgcagacacccatgcagccccaaccagctgcc
cctacagttcagtcccaactccctgcaccgatgcagcccacacttcaagctccactcctg
cctcagcaagctgccagagtagggccccctcctgctgctgccgctgttggccttccacaa
ggtctctcctctcctaaggccccaccacgctcccgctcctctcacactctgccacccgat
gctgccaagtctgagacagccccagctgcgcagaccaatggactgaatggaatccaaaga
gaagcacaatggaagcccgaccacttcgacacacttgcttctgagttcctctcctcctcg
tcatcctcctggcacaccacccagtctctgaccagaggctcctccctgcgtgcccccccc
tctgttcccgcctccacgtctgcgtcatccagcactctcccctcatccttctccctccag
ccctccgctctgtcagacctgcaggcactcgattcgtcgtcctcctcctcactttccacc
ccgtcaccgttagcctcctccctgctcccgcctcctccggtcccgtcccgtagccgctcg
caggagaccctgcgtgcctcccccggccccctcccgaccgaccctcttccagcccgaccc
agcagcactaatcccttcacaggcccactgccgcatcagcagccccgctcgctcaccccg
gacttcagcgtccagcgtcccgccccgacaccaaacattcagaggaccatgtctgctttt
actcaaccactcatccccacccttgctccaacagcagcccctaccgctgcacccaccttc
cagctccaaaggaccgcgtccctatttggtccgtcatccacttttccttctacgcctgct
cctctgctccccctcgccccatcacctatcccctccttgcccctggcatcagcctcctcc
attccgcccgtcctcgcacctcatcgccagccccctcccccaggagggaaaccgacccag
cgctgggtcacttttgatgatgatttgggttttcaacctccaaccaaaacaccacaggcc
cccctcctaacctccagttccctagtgtcccaatctcaaccctcaagctctgtgtttgac
tccgagcccgactggttatcctcggttccttcagtattcccaactctccctcctcccgtc
ccaggtagaactgtaaacagtaacccaaagcccccagagggacccagcgacgactgcttc
ttccgcagggagtaa
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