Anoplopoma fimbria (sablefish): 129113066
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Entry
129113066 CDS
T09102
Symbol
pdlim4
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ and LIM domain protein 4
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129113066 (pdlim4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129113066 (pdlim4)
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
129113066 (pdlim4)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
129113066
NCBI-ProteinID:
XP_054481165
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All DBs
Position
24:3179722..3231967
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AA seq
393 aa
AA seq
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MSQTVTLKGPSPWGFRLVGGRDFSTPLTVSRVTPGSKAAQGDLCPGDTILAINGDSTEVM
THMEAQNRIKTCTQQLTLNISRSGSGDRVWSPTVSEDGKTSPYMEPDSQNFRPITSGYGG
SSRKPSYTPEPQYPQTPQSPVGLRSPVVLQSPQGLQSPHGFQSPQAPQPTHLNNGHSRPN
NGHSYGYGNGNGHAQYNNPTGLYQNGSNGDRSLPSKMGGLSLSATHSPEPPTHSPXGRNG
FDPHSDVYKMLQDYEEPVSAPKQSGSFKYLQGILEAEDGGVSPTERMRNLKSPVRSPIPK
LGSPIPSPMTGLQKLPQCTRCCNGIVGTIVKARDKLYHPECFMCDDCGVNLKQKGYFFIE
DSLYCETHAMARVQPPEGYDVVAVYPNSKVELV
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaccgtgactctaaagggaccctctccttggggcttcaggctggtgggagga
cgggacttcagcacgcctttgaccgtctccagggtaacaccaggcagcaaggcggcccaa
ggtgacctgtgtccgggcgacaccatcctggccatcaacggcgacagcacggaggtcatg
acgcacatggaggcccagaaccggatcaaaacctgcacccagcagctcacgctcaacatc
agcaggtcgggatcaggagacagagtttggtcgccaacggttagcgaagacggcaagaca
agcccttacatggagcctgactcacagaatttccgtccaatcaccagcggatacggcggt
tccagtcgcaaaccttcgtatacccctgaaccccagtacccgcagacaccccagtcccca
gtgggtctccggtccccagtggttctccagtctccccagggtctccagtctccccatggt
ttccagtccccacaggctccccagcccactcacctgaacaacggacactcccgacccaac
aacggccacagctacggatacgggaacggcaacgggcacgctcagtacaacaacccaaca
ggactttatcaaaacggcagcaatggagacagatctctgccgagcaagatgggaggcctc
agcctcagcgccactcatagcccagagcctcccacacactccccgntgggtcgtaatggt
tttgacccacattcagatgtctacaagatgctgcaggactacgaagagcccgtctctgca
cccaaacagtctggatccttcaaatacctccagggaatcctcgaggctgaggatggaggt
gtgtccccaacagagagaatgagaaacttaaagtctccagtcaggtctccgatccccaaa
ctgggaagccccatccccagccccatgactggtcttcagaagcttccccagtgcacacgc
tgctgtaatggcattgttggcaccattgtgaaggccagagacaagctctaccaccccgag
tgcttcatgtgcgacgactgcggcgtcaacctcaagcagaaaggctacttcttcatcgag
gacagtctgtactgtgagacccacgccatggcacgcgtccagcccccagagggctacgac
gtggtggccgtttaccccaactccaaggtggagctggtctga
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