Anoplopoma fimbria (sablefish): 129113068
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Entry
129113068 CDS
T09102
Name
(RefSeq) neurobeachin-like isoform X1
KO
K24183
neurobeachin
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129113068
Membrane trafficking [BR:
afb04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
129113068
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Beta-prop_IFT122_1st
Laminin_G_3
WD40
Beta-prop_WDR5
Neurobeachin
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
WD40_WDHD1_1st
Beta-prop_EML
DUF4800
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
129113068
NCBI-ProteinID:
XP_054481167
LinkDB
All DBs
Position
24:complement(13667857..13758287)
Genome browser
AA seq
3042 aa
AA seq
DB search
MSSEKPVSAPPGSTSSLADTDRDSHPPPGSSVQPQPQQQVTAGAGSGAAGERMVSSAGSM
VLPAGVINPAVPIRNIQMKFAVLVGLIQVGEVSNRDIVETVLNLLVGGEFDLEMNFIIQE
AESIGCMVELLSHCEVTCQAEIWSMFTAILRKSVRNLQTSTEVGLIQQVLLKMSTVDDMI
ADLLVDMLGVMASYSITVKELKLLFSMLRGDNGIWPRHAIKLLSVLNQMPQRHGPDTFFN
FPGRSAAAIALPPIAKWPYQNGFTINTWFRQDPLNNINVDKDKPYLYCFRTSKGIGYSAH
FVGNCLIVTSLKSKGKGFQHCVKYDFQPRKWYMISIVHIYNRWRNSEIRCYVNGQLVSYG
DMAWHVNTNDSYDKCFLGSSETADANRVFCGQLGAIYVFSEALNPAQIFAIHQLGPGYKS
TFKFKSESDIHLAEHHKQVLYDGKLASSISFTYNAKATDAQLCLESSPRENPSIFVHSPH
ALMLQDVKAIVTHSIHSAIHSIGGIQVLFPLFAQLDYKQLNDCSVDTTVCATLLAFLVEL
LKSSVAMQEQMLGGKGFLVIGYLLEKSSRVHITRAVLEQFLSFAKYLDGLPHGAPLLKQL
CDHVLFNAAIWIHTPAKVQLSLYTYLSSEFIGTATIYTTIRRVGTVLQLMHTLKYYYWAI
NPLECSGISPKGLDGPRPSQKEIISLRAFMLLFLKQLILKDRGVKEDELQSILNYLLTMH
EDENIHDVLQLLVALMSEHPASMIPAFDQRNGIRVICKLLASKSESIRVQALKVLGYFLK
HLGHKRKVEIMHTHSLFTLLGERLMMHTNTVSVTTYNTLYEILTEQVCTQVVHKPHPEPD
STVKIQNPMILKVVATLLKNSSPSAELMEVRRLFLSDMIKLFSNSRENRRCLLQCSVWQD
WMFSLGYINPKNPEEQKITEMVYNIFRILLYHAIKYEWGGWRVWVDTLSIAHSKVTYEAH
KEYLAKMYEEYQRQEEENMKKGKKGSVSTISGLSATPVPVVNGNLEIDDNSQTQTPESEA
EYSEGAGGDSRNLLAEGVVKRPNGEALTPGEQSAGPGVRVEVHDLLVDIKAEKVEATEVK
LDDLDLSPEGLSGGVGVGGGGGIENGPLVEVDSLLDSAYCAVVQNLNGNLAPKDDTPGSG
VGIGSSLGLSGVSLEDDGNMGPLITLADEKDSVPSNNGFLFSKVDEKLLPALAATDPLVL
PSSDQPTPSGPVPALSTTSASDDLSLLAHMTSCGSDLTQTQSHASGELPEDGPFKIQSPL
ADISSIAEAESQAQIQAASRPDFPEGEGTSGAEGETAGLKTGGDTASTTSDTERSDDGKD
KDTKKIQTTATTQALHGRTAAQLERDLRVDLGFRGMPMTEEQRRQFSPGPRTTMFRIPEF
KWSPMHQRLLTDLLFALETDVHVWRSHSTKSVMDFVNSNENIIFVHNTIHLISQMVDNII
IACGGILPLLSAATSPSNSKSSANTKAGGAVPQRGSKGEEVTPVPGGGGAGGETELENIE
ATQGMSSETAVTFLSRLMAMVDVLVFASSLNFSEIEAEKNMSSGGLMRQCLRLVCCVAVR
NCLECRQRQRDRSCKSSLTSSKSQDSLHSASTNSKQDPDRLLQDVDINRLRAVVFRDVDD
SKQAQFLALAVVYFISVLMVSKYRDILEPQREIGRSTSLSGRSIRHEINSPTSTENPSTA
FSDRDKQTPTPVDDSPRAGLPHTDSGIGEEGHVAGSLNGSEMGLGLGLGLVGRETDRDRD
MVGGGGGGGTDLLCSLSDVRRSQESLLDSPHNPNSSQAPPSSISSISQTNKGINVKEILK
SLVAAPVDGGDLGQDSGPTPYHPDPALKTHPMLPMQFHSFDRSVVVPVKKPPPGSLSVNT
VGTPTTSGAVTAGSTPNIFAAATATPKSMINTTGATDSASSSSSSSSSFVNGATSKNLPA
VQTVAPMPEDSMENMSAYCEVAQCALRSGQTPPELKSFSSLAGFQAAPRDAGQCFSITTK
LERALEKVAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTGLVCMKSSTSVVELVMLLCS
QEWQNSIQKNAGLAFIELINEGRLLCHAMKDHIVRVANEAEFILNRQRAEDVHKHAEFES
NCAQYAADRREEEKMCDHLISAAKHRDHVTANQLKQKILNILTNKHGAWGTMSQSQLHDF
WRLDYWEDDLRRRRRFVRNASGSTHADISLKDLEEYGTEEDEEGLKSKKTFRSQSVVTQN
PEAELMLEGDDDAVSLLQEKEIDNLAGPVVLSTPAQLVAPVVVARGTLSVTTTEIYFEVD
EEDPTFKTTDAKVLAYSEGLHGKWMFSEIRAVFSRRYLLQNTGLEVFMANRTSVMFNFPD
QATVKRVVYSLPRVGVGTSYGLPQARRISLATPRQLFKSSNMTQRWQRREISNFEYLMFL
NTIAGRTYNDLNQYPIFPWVLTNYDSEELDLTLPGNFRDLSKPIGALNPKRAAFYAERYE
TWDDDSTPPHHYTTLYSTAHSTLMWMLRIEPFTTFFLNANDNKFDHPERAFSGIGCSWRN
CQRDTADVKELIPEFYYLPEMFVNSNEYELGVRDDGVSVCDVELPVWAKKPEDFVRINRM
ALESEFVSCQLHQWIDLIFGYKQRGPEAVRGLNVFNFLSYEGAINLDNADAAQREGIESQ
IQACGQVPSHLLIEPHPPRSSAMHLCFLPQSPLMFKDQMQQDVIMVLKFPSNSPVTHVAA
NTLPHLSIPAAVTVTCSRLFAVNRWHNTVGLRGAPGYSLEQAHHLPIEMDPLIANNSGVN
KRQITDLVDQSIQINTHCFVVTADNRYILVCGFWDKSFRVYSTETGKLTQIVFGHWDVVT
CLARSESYIGGDCYIVSGSRDATLLLWYWSGRHHIIGDNPNNSDYPAPRAVLTGHDHEVV
CVSVCAELGLVISGAKEGPCLVHTITGDLLRALEGPELCQRPRLISVSSEGHCIIYYERG
RFCNFSINGKLLAQMEVNDSTRAILLSSDGQNLVTGGDNGVVEVWQACDFKQLYIYPGCD
AGIRAMDLSHDQRTLITGMASGSIVAFNIDFNRWHYEHQNRY
NT seq
9129 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgagaagccggtttcagcaccaccggggtctacttcttcgctcgcagacacg
gacagagactcccatccgccgccgggctcctccgtgcagccgcagccgcagcagcaggtc
accgcgggcgctggctccggagccgccggggaaaggatggtgtcttcagccggctccatg
gtcctcccggccggggtgatcaaccccgccgtcccgatcaggaatatccagatgaaattc
gccgtgttggtgggcctgatccaggtcggggaggttagcaacagggacatcgtggagaca
gtgctgaacctgctggtgggcggcgagttcgacctggagatgaacttcatcatccaggag
gcggagagcatcggctgcatggtggagttgctgtcccattgcgaagtgacgtgccaggcc
gagatctggagcatgttcaccgccatcctccgcaagagcgtgcgcaacctgcagaccagc
acggaggtcggcctcatacagcaggtgctgctcaagatgagcacggtggacgacatgata
gcagacctcctggtggacatgctgggagtcatggccagttacagcatcacagtgaaggag
ctgaagctgctcttcagtatgctgaggggagacaacggcatctggccgagacatgctatc
aagctcttgtcagtgttgaaccagatgcctcagagacatggtcctgataccttcttcaac
tttccaggacgcagtgcagcggccatagcattgccgccaattgccaaatggccttaccag
aacggattcactatcaacacttggttcagacaggatccactcaacaacatcaatgtggat
aaagacaaaccatacctctactgtttccgcaccagtaaaggaataggttactccgctcac
tttgtgggaaactgtctcatcgtgacatcgttgaagtcaaaaggaaaaggatttcagcac
tgcgtgaaatatgatttccaaccccgcaagtggtacatgatcagcatcgtgcacatctac
aaccgctggaggaactccgagatccgttgctatgtcaacggtcaactggtctcctatggc
gatatggcctggcatgtcaacaccaatgatagctacgacaagtgtttcttgggctcatca
gagacagcagatgccaacagggtgttttgtggtcagctgggagccatttatgttttcagc
gaagctctcaacccagctcagatcttcgccattcaccaacttggcccgggatacaagagc
actttcaagttcaagtcggagagtgacatccacctggccgagcaccacaagcaggttttg
tacgatggcaagctggccagctccatctccttcacctacaacgccaaggcgacggatgcc
cagctctgcctggagtcgtcgccgagggaaaacccctccatcttcgtccactcgccgcac
gcactcatgctacaggatgtgaaggccattgttacccactccatccacagtgccatccac
tctataggaggaatccaggtcctgttccctctcttcgctcagctggactacaaacagctc
aatgactgcagcgtggacaccacagtctgtgccactctgctggcgttcctggtggagctg
ttgaagagctcagttgcgatgcaggagcaaatgctgggagggaagggctttctggtgatt
ggatacctgctggagaagtcgtcacgagtccacatcaccagggcggtacttgaacagttc
ttgtccttcgccaagtatctggatggtttacctcatggagcgcctctcctcaaacagctc
tgtgaccatgtcctcttcaatgccgccatctggatacacacccctgccaaggtccagctc
tccctctacacatacctgtcgtccgagttcatcggcaccgccaccatctacaccaccatc
cgccgtgtcggtactgtcctgcagctgatgcacactctcaagtactactactgggccatc
aacccgctggagtgcagtggaatcagccccaaaggtcttgacggaccacgaccatcccaa
aaggagatcatctccctcagagccttcatgcttctcttcctcaaacaactcatactaaag
gaccggggtgtgaaggaggacgagctgcagagtattctcaactacctattgaccatgcat
gaggatgagaatatccacgacgtgctccagctgttggtggctcttatgtctgaacatccg
gcctccatgatccctgcgtttgaccagagaaatggaataagggtgatctgcaagctactg
gcctctaagagcgagagtatccgggtccaagccctcaaagtcctgggctacttcctcaag
caccttggtcacaagaggaaggtagagatcatgcacacgcacagtctgttcacactgctg
ggagagaggctgatgatgcacactaacaccgtctctgtcaccacttacaacactctatat
gagattctgacagagcaggtctgtactcaggtggttcacaaaccccaccctgagcccgac
tccacggtcaagatccagaatcccatgattctaaaggtagtggccaccctgctgaagaac
tcctctcccagtgctgagctgatggaagtcagaagactctttctttctgacatgataaaa
ctcttcagtaacagccgtgaaaaccggcgctgcctgctgcagtgctctgtttggcaggac
tggatgttctcccttgggtatataaaccccaagaaccctgaggagcagaaaataaccgag
atggtgtacaacatcttcaggatcctgctctaccatgctatcaaatacgaatggggaggg
tggcgggtctgggttgataccctatccatcgcacactccaaggtgacttacgaagcccat
aaggagtacttggctaagatgtacgaagagtaccagcgccaagaggaggaaaacatgaag
aaggggaagaaaggctctgtgtccaccatctctgggctttccgctacgcccgtccctgtc
gtcaatggcaacctcgagatcgacgacaactcccagacacagacacccgagagcgaggcc
gagtacagcgagggggctggcggagactcgcgcaacctcctcgcagagggcgttgtgaag
cgacccaacggggaggccctgacacccggcgagcagagcgctggtcctggtgtgagggtg
gaggtccacgacctgctggtagacattaaagcagagaaggtagaggccacagaagttaag
ttggatgacctggacttgtcaccagaaggcctcagtggaggtgtgggtgtaggaggtggg
ggaggaatagagaacggacctctggttgaggtggattctcttctggacagtgcttactgc
gctgtagttcaaaatctgaatggaaacctggcgcctaaagatgacacgccaggctcaggg
gtcgggatcgggtcaagcctggggctttcgggagtcagccttgaggatgatgggaacatg
ggtccgctcatcacattggctgacgagaaggacagtgtcccaagcaacaacggatttctc
ttcagcaaggttgacgagaagctgcttccggctctggcagccacagacccccttgtactg
ccgagttcagaccagcccactccatccggcccagtcccggctctctccaccaccagcgcc
agtgatgacctgagcctgctggcccacatgactagctgtggctctgatctaacgcagacc
cagagccatgcttctggggaacttccagaggacgggcctttcaagatccagagccctctt
gctgacatcagctctattgctgaggctgagagccaagctcagatccaggcagcatcgaga
ccagatttcccagagggagagggaacatccggggcagagggagagactgcagggcttaag
acaggtggagacacagccagcaccacctctgatacagagaggtcggatgatgggaaagac
aaggacacgaagaagatccaaactactgcgaccactcaggccctccatggtcgtacagca
gcccagctggagcgggacctccgcgttgatctgggcttcaggggcatgcccatgacggag
gagcagcgccggcagttcagccccggcccacgcaccaccatgttccgcatcccagagttc
aagtggtctccgatgcaccagaggttgctcactgacctgctgttcgccctggagactgac
gtgcatgtgtggaggagccactccaccaagtcggtgatggattttgtgaacagcaatgag
aacatcatctttgtccacaacacgatccacctcatttctcagatggtggacaacatcatc
atcgcctgtggaggcatcctgcctctcctgtctgctgccacctccccttctaattctaag
agtagtgccaacactaaggcaggaggagccgtaccccagagggggtcaaagggagaggag
gtgacccctgttcctgggggaggaggcgcagggggagagacggagttggagaacatcgag
gcgacacagggcatgtcttcagagacggcggtcaccttcctgtctcgtctcatggccatg
gtggacgtactggtgttcgcaagctctctcaacttcagcgagatcgaagcagagaagaac
atgtcgtcaggagggctgatgaggcaatgcctccgcctggtatgctgcgtggcagtgagg
aactgtctggagtgcaggcagagacagagagatagaagctgcaagtcctccttaaccagc
agcaagtcacaggacagcctccacagtgcctccaccaacagcaagcaggatccagacaga
ctcctgcaggacgtggacatcaatcgtcttcgagctgtggttttcagagatgtggatgac
agtaagcaggctcagtttctggcgctggcagtcgtctactttatctcagttcttatggtg
tccaagtaccgggatattttggaaccccagagagagattgggaggtccaccagcctatca
gggagaagcatacgccacgagataaactccccaaccagtacagagaacccatccacagcc
ttctctgaccgtgacaaacagacccccacccccgtggacgactctccccgggctggtctc
ccccacacagactcaggcatcggggaggagggccacgtggccggatccctgaacggctca
gagatgggtctggggctcggcctcggcctggtaggcagagagacagatagagacagagac
atggtgggaggaggtgggggaggaggcacagatctgctgtgtagtctgtctgatgttagg
aggtcacaggagagccttctggattctccccacaaccccaactccagccaagctccgcct
tcgtccatctccagcatcagccaaacaaacaaaggcatcaatgtcaaggagatcctgaag
agcttggtggcagctcccgttgatgggggggatctgggacaggattctgggccgacaccc
taccacccagaccctgccctgaagacgcaccccatgctgcccatgcagttccactccttc
gacaggagtgttgttgttccggtcaaaaagccaccacctggcagcctgtcagtcaacact
gtgggtacgcccactactagcggagcagtcactgctggcagcacacccaacatttttgca
gctgcgacagcaacacccaagagcatgatcaacactacaggtgccacagactctgcctcc
tcttcctcctcctcctcttcgtcgtttgtaaacggtgcaactagcaagaatctgccagcg
gtgcagacggtggcccccatgccggaagactcaatggagaatatgagtgcctattgtgag
gtggcgcagtgtgcgctgcgcagcggtcagacgccccctgagctcaagtcttttagctct
ctggcaggcttccaggcagctccccgagatgcaggacagtgttttagtatcaccaccaag
ctggagcgcgctctggagaaagtggcgcccctgctgagggagatttttgtggactttgct
cccttcctgtccaggacgctgctgggtagccatgggcaggaactgctcatagaaggtaca
ggtctggtgtgcatgaagtctagcacgtctgtggtggagctcgtaatgctgctctgttct
caggagtggcaaaactccattcaaaagaacgctggactggccttcattgagctcatcaac
gaaggaagacttctctgccacgccatgaaggaccatattgtgcgtgttgccaacgaagca
gagttcatcctgaacagacagagggcagaggatgtacacaaacatgctgaatttgagtct
aactgcgcccagtacgctgcagaccggagagaggaggagaaaatgtgcgatcacctcatc
agcgctgccaagcacagagatcatgtgaccgctaaccagctgaaacagaagatcctcaac
atcctgaccaataagcacggagcttgggggacaatgtcacagagccaattacatgacttc
tggcgtctagactactgggaggacgacctgaggaggagaaggagatttgtgcgaaatgcc
tctggatctactcacgccgacatatcactcaaagatctggaggaatacggtacagaagaa
gacgaggaagggcttaaatcaaagaaaactttccgcagccaatcagtggtcacgcagaac
ccagaggcggagttaatgctggagggagacgacgacgcagtcagcctgctgcaggagaaa
gagattgataaccttgctggcccagtggttctgagtactccagctcagttggtggctcca
gtggtggtggctcgaggcactctgtccgtcaccactactgagatctactttgaggtggat
gaagaggatcctacattcaagacgactgatgctaaagtgctggcctactcagagggtctg
catggtaaatggatgttcagtgagatccgagctgtgttctccagacgctacctgctgcag
aataccggactagaggtcttcatggccaacagaacgtctgtgatgtttaacttccctgac
caggccacggtcaaacgggtggtctacagtctcccacgggtcggggtaggaacgagttac
gggctgccacaggccaggcggatttccttggccacccctcgtcagctcttcaagtcatcc
aacatgacccagcgctggcagaggagagagatctccaactttgagtacctcatgttcctc
aacacgattgcagggaggacttataatgatttgaaccagtaccccatcttcccctgggtc
ttgaccaactatgattcagaggagctcgacctcactctacctggcaacttcagagacctc
tccaagccaatcggtgccctgaatcccaagcgagcagcgttttatgcagaacgctatgag
acgtgggacgacgacagcacgcctcctcaccactatacaaccctgtactccactgctcat
tcaacgctgatgtggatgctcagaatagagccctttacaacgtttttcctcaacgctaac
gataacaagttcgaccatccggaaagagccttctctggtatcggctgctcgtggaggaac
tgccagagagacacagctgatgtcaaggagctgatcccagagttctactacttgcctgag
atgttcgttaacagtaatgagtacgagctcggggtgcgtgatgatggagtttctgtgtgc
gacgtggagcttcccgtctgggcaaagaaacctgaagactttgtccgcattaaccggatg
gccttggagagcgagtttgtgtcgtgccagcttcaccagtggattgatctaatatttggc
tacaagcagcgagggccagaggcagtccgaggtctcaacgtgttcaacttcttgtcctac
gagggagcaatcaacctagacaatgcagacgctgcccaacgagaggggattgagtcccag
attcaggcatgtggtcaggtcccatcccatctgctgatcgagccacacccacctcgctcc
tccgctatgcacctgtgtttccttccccagagcccgctgatgtttaaggatcagatgcag
caggacgtcatcatggtgctcaagttcccctccaactcccccgtcactcacgtcgcagcc
aacacgctcccccacctcagcataccagcagcggtcaccgtcacgtgtagccggctgttt
gccgtcaaccgctggcacaacacagtcggcctccgtggagctccaggatactccttagag
caggctcatcatctacccattgagatggaccctctcatagcaaacaactcaggcgtgaac
aagcgccagatcactgaccttgtggaccagagcatccaaatcaacacgcactgttttgtg
gttactgctgacaaccgctacatcctggtctgcggcttctgggacaagagcttccgtgtt
tactcaactgaaactggaaaactgacccagatagtttttggccactgggatgtagtgacg
tgtctggcaagatcagagtcctacattggcggagactgctacatcgtgtcaggctccagg
gatgccactcttcttctgtggtactggagtggacgacaccacattattggggacaacccg
aacaacagtgactatccggctccgagggcagtactgacgggacatgaccacgaggtggtg
tgtgtgtctgtctgtgcagagcttggactggtcatcagtggggctaaagagggcccgtgc
ttggtccacaccatcacaggggacctgctcagggccctggaggggccagagctgtgtcag
cgacctcgcctcatctccgtgtccagcgagggccactgcatcatctactatgagagaggc
cgcttctgcaacttcagcataaatggaaaactgctggcacaaatggaggtcaacgattcc
acacgggcgatcctgttgagcagcgacggacagaacctggtgactggaggcgataatggc
gttgtggaagtgtggcaggcgtgcgacttcaaacagctttacatctatccaggctgtgac
gcaggcatccgggccatggacctctcacatgaccagaggactctgatcactggcatggcg
tccggcagcattgtggcgttcaacatagacttcaaccgctggcactacgaacaccagaac
aggtactga
DBGET
integrated database retrieval system
