Anoplopoma fimbria (sablefish): 129113090
Help
Entry
129113090 CDS
T09102
Symbol
sptbn4a
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04517
IgSF CAM signaling
afb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129113090 (sptbn4a)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129113090 (sptbn4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129113090 (sptbn4a)
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
129113090 (sptbn4a)
Intermediate filaments
Intermediate filament-binding proteins
129113090 (sptbn4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
129113090
NCBI-ProteinID:
XP_054481204
LinkDB
All DBs
Position
24:22165382..22190819
Genome browser
AA seq
1574 aa
AA seq
DB search
MLMARDTARDEAQKLHRKWLKHQAFMAELARNKEWLAKIEQEGQELIQEKPELRSVVQQK
LEEIRECWSDLESTTKAKARQLFENNKPEPAMKSYSDLDSQLSHLERQPPQLEQVHHLPT
FNEQLQKFQAMESQIGDFYKDVGELGSLQSVCLPQRGLMTGDREGGEQSGVVETRIVRLI
EPLKERRRILLASKEMHQVAQDLEDEILWIQERLPXASCKDYGTNLQSVQQHVKKNQTLQ
RELTGRRARVEEVLDRAGIIASLRTPEVEFVREGAGHVRQLWEVLQLEAERRCVMLDATL
QAQQYYSEAAKVESWLSGQKLHLVNEERGTDEASTLQLLKAHLALEQTVETYAETVGMLS
QQCQRLLELAHPESEQLTKQQSHIDRLYVSLKDMVEHRKTKLEQQYWLYQLNKDVEELEK
WITERETVASSTELGHDLEDVTVLQERFTKFASETNSVGQQRMEQVNKMVNEMIDCGHSD
AATIAEWKDGLNESWADLLELMETRRQMLAASHQLHKFFTDCKEVLAQIAGKMKQLPEVR
ACQANITNPATLQRLMHSFEHALQLLVAQVRQLQENAAQLRTIYAGEKAEAIMVKEQEVM
EAWKELLGSCEASRVQVTSVTDKVQFFSVVRENLMWMEGIMGQIGWDEPRDLTALEMMIK
QHQELKAKVDGRSKTIQQCADLGKILIAAGNPASEEIQEKLDSLLAKQRDLVEKWDKHQE
KLQRKQEKFQFAQETVRAEAWLKAKEPLITSREPEGGGARAQTDEVEQLILRHEAFRKAA
VTWKERFSSLRQLSAAEKKKEEEMKTTPLSSRRMFPLSCLTPSVPSTSATSSFLRQTVQA
HIEHKPLQTSLDLGATPASQRLSSTLASYKPVINGSGYHGLEQQSSGKLVSSSYLGMNHQ
AAGGGSDSGFSALTSQSGGADTSTYLGINHRTAGSVESSGYFGLTTGCVGSTQNHQGSGR
LGSSGNLAQQPSSGGMGSTGFVPQQNMGSSGYLSQPQNMGSSGYLGHQPNLGSTGYLAQQ
PNMGSSGYLAQQPNMGSSGYLAQQPNMGSSGYLAQQPNMGSSGYLAQQPNMGSSGYLAPQ
PNTGSSGYLAQQPNMVSSGYIAQNYQSSGGLGSSGLLAQNNYSSGSLGSSGYLAQSGGIM
DPKMAYAWQHLKADFMQPRINHIHKAVNPLLEASRVQREQFGDIPMADMVGPESGLELLH
GRLQRDPRGSRSDPQMDHLRREREYKLGRQTSSEQEIQARLNELPLIVRQERYRRRLERQ
SSSEQEGSSKQRLQRQDSSDLEGSVKDGSDKRSGEKRSTMAEIVEQVQEREAAQARGEPY
RPSSSLSAPVTRFDGRPRARDRPKPRRRPRPKEPEETRRSRSAPATGAPTTPQPPSHTAQ
NEGFLYRKKATASDLEAQQRSPNSKSWTNVFCVLKEGQLTFYKDARHRTTPYNEEPPVDL
CNCTFDPSMGYKKKKNVFILQMNDGINLAFHAKDEEDLKAWTSNITTCIAEHESMGKWDK
PGTSSMDPDNSERKEKSEGDADARSERSELAEGEERSEKERSEKGDGSEKLDTSEIADKM
EGGAGGSSTSGKSK
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atgcttatggcccgagacacggcgcgggacgaggctcaaaagctacacaggaagtggctg
aagcaccaggcctttatggcggaactggcccgcaataaggaatggcttgccaagatagag
caggagggtcaggagctgatccaggagaagccggagctgcgttcagtggttcagcagaag
ctggaggagatcagagagtgctggtccgacctggagagcacaaccaaggccaaggcccgc
cagctctttgaaaacaacaagcctgagccggcgatgaagagctactcggaccttgacagc
cagctctcccacctggagaggcagcccccccagctcgagcaggtgcaccatctccccacc
ttcaacgagcagctccagaaattccaggctatggagtctcagatcggggacttttacaag
gatgtgggagagctgggtagcttgcagagcgtgtgcctaccccagcgagggctgatgacg
ggtgacagggagggcggggagcagtcgggcgtggtggagacccgcatcgtccgcctcatt
gaaccgcttaaggagagacgccgcatcctgctggcttccaaagagatgcatcaggtcgcc
caggacctggaggacgagatactgtggattcaggagaggcttcccntggcctcctgtaag
gattatgggactaacctccagagtgtacagcagcatgtaaaaaagaaccagacactccag
agggagctgacggggcgccgggctcgcgtcgaggaggtcctggaccgcgcggggatcatt
gcttccctaaggaccccggaggtggagtttgtgcgcgaaggggccgggcacgtgcgccag
ctgtgggaggttttgcagctggaggcagagaggcggtgtgtgatgctggatgccacgctg
caggctcagcagtactacagcgaggcggctaaagtggagtcatggctgtcgggtcagaag
ctccatctggtcaacgaagagagaggcacggacgaggcgagcaccctgcagctgctgaag
gcccacctggctctggagcaaacggtggaaacgtacgcagagacagtcggcatgctatcc
cagcagtgccagcgtctactggaactcgcacacccagaaagcgagcagctcaccaagcag
cagtcacacatagaccggctgtatgtgtctctgaaggacatggtggagcacaggaagacc
aagctggagcagcagtactggctttaccagctcaacaaggacgtggaagagttggagaag
tggatcacagagcgggagacggtggccagttccactgagctgggccacgaccttgaggat
gtcacggtgcttcaggagagattcacaaagtttgcctcagaaaccaacagcgtcggccag
cagcgaatggagcaggtgaacaaaatggtgaatgaaatgatcgactgcggccactcggac
gcggccaccatcgccgagtggaaggacgggctgaacgagtcctgggctgacctcctggag
ctgatggagacccgcaggcagatgctagcggcgtcgcaccagctgcacaagttcttcacc
gactgcaaagaggtcttggctcagatcgctgggaagatgaagcagctgccagaggtgagg
gcgtgccaagctaacatcaccaatccagccaccctgcagagactcatgcactcctttgag
catgcccttcaactgctcgtggcacaggtgaggcaactgcaggagaacgcggcccagttg
aggaccatttatgcaggcgagaaggccgaggccatcatggtcaaagagcaggaggtgatg
gaggcttggaaggagctgctgggctcttgcgaggccagtcgcgtccaggtcacctcagta
actgacaaggtgcagttcttctcagtggtgcgtgaaaacctgatgtggatggaaggcatc
atgggccagattggatgggatgagcccagggatttgacggctctagagatgatgatcaaa
caacatcaggagctgaaagccaaagtagacggacgcagcaagaccatacagcagtgtgca
gatctgggcaagatcctaatagctgccgggaatcctgcatcagaggagatacaagagaag
ctggacagtcttctggctaagcagagggatcttgttgaaaaatgggacaaacaccaggag
aagttacaacgcaaacaggaaaagttccagtttgcccaggagacagtaagggcggaagcc
tggcttaaggccaaggagccgttgatcacctccagggagccagagggaggaggggcccgg
gcccaaacagatgaggttgagcaactcatccttcgccatgaggccttccgcaaggctgct
gtaacctggaaagaacgcttcagctctctccgccagctttccgcagctgagaagaaaaaa
gaagaggaaatgaagacaaccccactctccagccgaaggatgttcccattatcatgtctg
actcccagcgttccctcaaccagtgctacctcatctttcttgaggcagactgtacaggcg
cacatagaacacaaacccttacagaccagtctggatctgggtgccacccctgcaagccag
agattgtcctcaaccctagccagctacaagccagttataaatggatcaggctaccacgga
ttggaacagcagagcagtgggaagttggtgagctcctcgtaccttggaatgaaccaccag
gcggccgggggtggaagtgactcgggtttctcagcgctgacctcccagagcggtggagca
gacacttctacttaccttgggataaaccatcgaactgcgggcagtgtagagagctctggg
tactttggactgacaactgggtgtgtgggaagtacgcaaaaccatcaaggcagtggcagg
ttaggaagttcaggtaacctagctcagcagccaagcagtggaggtatgggaagcactggc
tttgtgcctcaacagaatatgggcagttctggatatttgtctcaaccacaaaacatggga
agttctggatacttgggacatcagcctaatttaggtagtacaggatatttggcccaacag
cctaacatggggagctctgggtatttggcgcaacagcctaacatggggagctctgggtat
ttggcacaacagcctaacatggggagctctgggtatttggcacaacagcctaatatgggg
agctctgggtatttggcacaacagcctaatatggggagttctgggtatttggcaccacag
cctaatacagggagttcagggtatttggcacaacagcctaatatggtgagttctggatac
atagcacagaattatcagagcagtgggggattgggtagctcaggccttctggcacaaaat
aattacagcagtggaagtctgggcagttctggttaccttgcgcagagtggtggcatcatg
gaccctaaaatggcatatgcatggcagcacctgaaagctgacttcatgcagcccagaatc
aaccacatccacaaggctgttaaccccttactagaggccagcagagtgcagagggaacag
tttggggacatcccaatggcagacatggtggggccagagtcagggctggagctcctccac
ggccgtctccagagggatccccgtggcagccgctctgatcctcagatggaccatctgagg
cgagagagggagtacaagctgggaagacagacctccagtgaacaggagatccaggccagg
ctgaacgagttgccactgattgtacgtcaggagcgctatcggaggcgcctggagaggcag
tcgtccagcgaacaggaggggagcagcaagcagagactacagagacaggactcgagtgac
ctcgagggctctgttaaggatggctcagacaaacgctcaggggaaaagagatctaccatg
gcagagattgtagaacaggtccaggagagggaggcagcgcaggcacgaggagaaccttat
cgcccttcaagcagcctctcagcaccagtgactcgttttgacggacgccctcgtgcccga
gaccgccccaaaccaaggaggaggccccgtccaaaagaacctgaggaaacacgacgttct
cgctcggctccagctactggtgccccaacgacacctcagccgccttcacacactgcccag
aatgaaggcttcctctatcgcaaaaaggccaccgcctctgaccttgaagctcagcagaga
agcccaaacagcaagtcctggacgaacgtattttgtgtgctgaaggagggacagctgacc
ttctacaaggatgctaggcaccgaaccacaccttacaatgaggagcccccagtagacctt
tgtaactgcacgtttgatccttcaatgggatataagaagaagaaaaatgtcttcattctt
caaatgaacgatggaatcaacttggcattccatgcaaaagatgaggaggacctgaaggcc
tggacttcgaacatcaccacctgtatagctgagcacgagtccatgggcaagtgggacaag
ccgggaacctcgtccatggaccccgacaactcggagaggaaagagaagtcggagggggac
gcggacgccaggtcagagaggtctgagctggctgaaggggaggagcggtccgagaaggag
aggtcagagaaaggggacggctcggagaagttagacacgtcagaaattgccgacaaaatg
gagggcggggcggggggctccagcacgtccgggaagagcaaatga
DBGET
integrated database retrieval system
