Anoplopoma fimbria (sablefish): 129113106 Help Entry 129113106         CDS       T09102                                  Symbol thoc2 Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism afb  Anoplopoma fimbria (sablefish) Pathway afb03013   Nucleocytoplasmic transport afb03040   Spliceosome Brite KEGG Orthology (KO) [BR:afb00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     129113106 (thoc2)   09122 Translation    03013 Nucleocytoplasmic transport     129113106 (thoc2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:afb03019]     129113106 (thoc2)    03041 Spliceosome [BR:afb03041]     129113106 (thoc2) Messenger RNA biogenesis [BR:afb03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      129113106 (thoc2) Spliceosome [BR:afb03041]  Complex C   Other components    EJC/TREX     129113106 (thoc2)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     129113106 (thoc2) SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  129113106 NCBI-ProteinID:  XP_054481224 LinkDB All DBs Position 24 Genome browser AA seq 1563 aa AA seqDB search MATLILPGEWIKNWEKSGKHEFVQLCKELTEKTDHGSEIRDIQAALYELCWQVVLGNLKL DLAVNVLGDMMELRDDMPSILADVFSILDLETGALEEKIKRDHYTTLVGACLFLVPDAIM KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL SGNITSHIVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDEFFLSLIKSYMCEPLTLC HILGFKFKFYQEPNEETPKSLYHIAAALLHHNLIELEDLYVHLMPVDANIVEEHKRDITE AKQIARKLVMVVLPSEKSEDKDKEKEKEEEKNDKPPDNQKLGLLEALLRIGDWHHAQSIM DQMPSFYATSHKAIALALCQLVHLTVEPLYRRAGLPKGARGCVLRPLRNKRAPRPAEIFE DLRRDTFSMICYLGPHLSHDAILFAKIVRLGKAFMKEYQSDGRSDYKEKMETLLSCFLSI ADQVLLPSLSLMECNACMSEELWGLFKLFPYQHRYRLYGQWKNETYTSHPLLVKVKAQTV ERAKYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLTS LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN QLKAGKSFDLLILKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS QRLKDALLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLVQFGGFLAS NLSTEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNRQQQKV HKYVAACEQVMTPVHEAVVSLHPARVWDDLRPQFYATFWSLTMYDLAVPHSAYEREVNKL KVQIKAIEENPEIPMNKKKKEKERCTALQEKLQEEEKKQLEHVQRVLHRLKLEKDNWLLA KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIY TVASCTENESHRYGRFLCCMLETVTRWHSDRAIYEKECVNYPGFLTIFRATGFDGGNKAD QLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALEC RVHKICLEEKDKRPDLYALAMGYSGRLKSQKVHMVPENEFHHKEQPARSATPATQQNGPG STGKPVTSISKTEDGMSEDGDRGKDKSQGTTKPVNKANSAAAKVTTSNGNGALNSTKAVK ERDDKEKSGKEKKEKKEKTPGSTPETKAENRREKQRDERAGKEERVAREGKEKTPKAERE KVKAEEKSSKDDKAKAGNGEPMESRERDAIKESKSKEKGDRSAVAGSLKSPVPRLESAES ERDHKRRKIDSHSSPSHSSSVKDNSNEPKESTSKHHGNYNSVSRSKSREREMEKKDSDNT QGRSKEKKEEKDRKERKRDYAVNELETSQESKRRKDENGTNSSKNSKSASPSCDSPLSAE KEKIKRSKSSSKEKVESVKPERTSSGGKKESRHDKEKSEKKEKRDSSGGKEEKKHHKSSD KHR NT seq 4692 nt NT seq  +upstreamnt  +downstreamnt atggcgacacttatcctccctggtgaatggatcaaaaactgggaaaaatcaggaaaacac gagttcgtacaactctgcaaagaactcacagagaaaacagatcatggaagtgagattaga gatatacaggcagccttatatgagctctgctggcaagttgtactggggaacctgaagttg gatcttgccgtcaacgtccttggagacatgatggaactccgagatgacatgccatcaatt ttagcagatgtgttcagtatactagatttagagactggtgcactggaagaaaaaatcaaa cgtgaccattacacaacactggtgggagcatgtttgtttttggttccagacgccatcatg aaagagaggctggatccagaaacccttgaatctcttggacttataaaacaagctcatcag ttcaatcagaagattgtaaaaatcaagactaaactattttacaagcaacagaagtttaac ttgctaagggaggagaatgagggctacgccaaactaatcaccgagcttggccaagacctc tcgggcaacatcaccagccacattgtcctggagagcatcaagtccctcataggatgtttc aacttggaccctaatcgtgttttggacataatcttggaggtgtatgagagtcgatcggac caggatgagttcttcctgtctctcataaagtcctacatgtgtgagccactcaccctttgc cacatcctgggttttaagttcaaattctaccaggagcccaatgaggaaacccccaagtca ctttaccacattgctgctgctctgcttcaccataacctgattgagctggaagatctctac gtacatcttatgccagtagatgccaacatcgtagaggaacacaaacgagatatcacagag gccaagcagattgcccgcaagctggtcatggtcgtgttgccctcagagaaaagtgaagac aaagacaaggagaaagaaaaggaggaggagaagaacgataagccacccgataaccagaag cttggtctgttggaagcgctgcttagaattggagactggcaccacgcccagagtattatg gaccagatgccatccttctatgctacttctcacaaggccattgcgctggcactctgccag cttgtgcatctgactgtggagcctctttacagacgggctggcctcccaaaaggggcaaga ggatgtgtactgcgtccactgaggaacaagcgggcccctcgcccagcagagatcttcgag gacctacgcagggacacgtttagcatgatctgctacctgggccctcacctctcccacgac gctattctttttgccaagattgtgcgtctgggaaaggccttcatgaaagagtaccaaagt gatggcagatctgattacaaagaaaaaatggaaacgcttttgagttgtttcctgagcatt gcagaccaggtgcttctcccttctctctcgctgatggagtgtaatgcttgcatgtctgag gagctgtggggtctcttcaaactctttccctaccagcacaggtaccggttatatggacag tggaagaatgagacatataccagccatccgctgctggtcaaagtcaaagctcaaactgta gaaagggccaaatacattatgaagcggttgaccaaagagaatgtgaaacaatctggaagg cagattggaaagctgagccatagcaatccaactatcctctttgactatatgctttctcag atccaatggtacgacaaccttatcgttccagtggtggactcattgaaatacctcacatcc ctcaactatgatgtcttggcctattgcatcattgaggctctggccaatcccgagaaggag aagatgaagcatgacgacaccaccatctcatcgtggcttcagagcctggcaagtctgtgt ggagccgtgttcagaaaatacccaatagagttggctggtcttcttcaatatgtcaccaat cagctaaaagcagggaagagttttgacctgttgatcctaaaagaggtggtgcagaaaatg gctggcattgagatcacagatgagatgacctcagagcagttagaggcaatgaccggaggg gagcaactcaaagctgagggtggctactttggccagatcaggaacactaagaagtcgtca cagcgtctgaaggatgcactgctggaccacgaattggccctgcctctgtgtttactcatg gcccagcaacgaaatggggttgttttcttagagggtggagagaaacatctaaagcttgtt ggccacctctatgaccagtgtcatgacaccttggtgcagtttggtggctttctggcctcc aacctcagcactgaggactacatcaagcgggttccctccattgacatcctctgtaaccag ttccacactccccatgatgcggccttcttcctgtctaggccgatgtacgcccatcagatt ttgtcaaagtacgacgagttgaagaaagcagagaaaggcaaccggcagcagcagaaggtt cacaagtacgtggcggcctgtgagcaggtgatgacaccagtgcacgaggctgtagtatcc ctccatcctgccagggtctgggacgacctccgcccccagttctacgctaccttctggtcc ctcaccatgtatgacctggccgttccacattctgcctacgagcgtgaggtcaacaagctc aaggtccagatcaaggccatcgaggagaatccagagatacccatgaataagaaaaagaag gagaaggagcgctgcactgccctgcaagaaaaactgcaggaagaggagaagaaacagctg gagcacgtccaaagggttctacaccgcctcaaactggagaaagacaactggttgttggcc aaatctacaaagaacgagaccataacaaagtttctgcagctctgtctgttcccccgctgc atcttctcgtccatcgacgctgtgtactgtgctcgctttgtcgagctggtccaccagcag aagacacccaacttctgcaccctcctgtgctatgacagggtgttctccgccatcatttac actgtagccagctgtacggaaaacgagtctcaccgctatggacgcttcctctgctgcatg ctggagacggtgacccgttggcacagcgaccgtgcaatctatgagaaggagtgcgtcaat taccccggcttcctgaccatcttcagagccacaggcttcgatggcgggaacaaagctgat cagctggactatgagaacttcaggcatgtggtgcacaaatggcactacatgctgactaaa gcttcagttcactgcctggagacgggagattacacccacatccgtaatattctcatcgtg ctcaccaagatcctgccctgctaccccaaagtcctgaatctgggccaagcgctggagtgt cgtgtccacaagatctgccttgaggagaaggataagaggccagacctctatgccttagca atgggttattcaggtcggttgaaaagccagaaggtgcacatggtcccagagaatgagttt caccacaaggagcagccagcacgcagtgccacccctgccactcaacagaacggcccaggc agcacaggcaagcctgtcaccagcattagcaagacagaggacgggatgtccgaggatggt gatcggggcaaggataaatctcaggggaccacaaagccagtgaacaaagccaacagtgca gcggccaaagtgaccaccagcaacgggaacggtgctcttaacagcaccaaagccgttaaa gagcgggacgacaaagagaagagcgggaaggagaaaaaagagaaaaaggaaaagacacca ggcagcactcccgagacaaaggcggagaaccgtcgggagaagcagagagacgagagagca gggaaggaggagcgtgtggctcgggagggtaaggagaagacccccaaggcggagagggag aaggtgaaggctgaggaaaagagcagcaaagacgacaaggccaaggccggcaacggggag cccatggagtccagggagcgcgatgccatcaaggagtccaagagcaaggagaaaggagac aggagtgcagtggccgggtccctaaagtcaccagttcccagattggagtcagccgaatct gagagggatcacaaaagacgaaagatcgacagtcactcttctccgtcccactcctcgtct gttaaggacaatagcaacgaacccaaggagtccacatccaagcaccacggcaactacaat tcagtttcccggtccaagagcagagagagggagatggagaagaaagattcagacaacaca caaggccgatccaaagagaagaaggaagagaaggatcgcaaagaaaggaaaagagactat gctgtcaatgagcttgagacgagccaagagtccaaacgtagaaaggatgagaatggaacg aattcctccaaaaacagcaagagtgcaagtccttcctgtgactccccgctttcagctgaa aaagagaagatcaaaagatctaaatcttcaagtaaagagaaggtcgagtctgtgaaacct gagcggacttcctccggaggcaaaaaggagtcaagacatgacaaagagaaatctgaaaag aaggagaagagggacagcagcggaggaaaagaagagaaaaagcatcataaatcctctgac aagcacagataa

DBGET integrated database retrieval system