Anoplopoma fimbria (sablefish): 129113118
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Entry
129113118 CDS
T09102
Symbol
zgc:163098
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129113118 (zgc:163098)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afb03041
]
129113118 (zgc:163098)
Spliceosome [BR:
afb03041
]
Complex A
U2 snRNP components
U2 related factors
129113118 (zgc:163098)
Complex B
129113118 (zgc:163098)
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Motif
Pfam:
Surp
CID
cwf21
RRM_1
CTK3
Motif
Other DBs
NCBI-GeneID:
129113118
NCBI-ProteinID:
XP_054481242
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Position
24:complement(10410092..10419924)
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AA seq
878 aa
AA seq
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MADRKGKPVTTIKTLTKKEQEELKKKEEEKAADVFEEFLASFETNEKSGVKTFVRGGIVN
ATKEEEAAEVKKNKLYRPATKFVPVSQHGSPVSSAESKKATFKKRSEEKKKSNLELFKEE
LKLIQEEREERYKRKKSDSGGGGGGFGELDTPLSGRSALYDDLTVPTTTNLYISCISPKM
NEEILCKEFGKYGPLASVKIMWPRTDEERCRTSNRAFVAFMTRKDAERALSSLDGKVIMG
FEMKLGWGKPARIPPQPLYTPVGVRATPPPPSGLPFNAQPRDRFRNDFTKPLGMSKGELD
KTLSEAVVKVVIPTERNLLFLIHRMIEFVVREGPVFEAVIMNKEKSNPDYKFLFDNKSQD
HVYYRWKLFSILQGQSPTEWRTADFRMFRGGSMWRPPIINNYSQRGEDREDVEEDVPPEE
EVKRGQLRAEHKQRLDALLKELTPSREDIANAMLFCLERADAAEEVVGTITESFSLIQTP
LQKKIARLYLVSDILHNSCAKVAGASYYRKYFETKLTQIFGDLNVAHKNIQARLQAEQFK
QKVTSCFRAWEDWAIYPEPYLIRLQNIFLGLAKAVEELTETTEDVSSFIYGAPIDKAPID
GLPLHRAPVDDLDGCPLGWDPLDGVPVDDIDGVPLGVAIDDIDGMPLEESNVPLSRVPLS
KWEKATDTGTFSQAKTESKWDMVVEPNVEEEVTVSVNSQDGDEDSQSDSSDDSGRLSKYE
SADFQSSLKSFQMSESKRKRLRELEVKVMKTQDELESGKRSRKSGMSIQQQVEHYRNKLL
QKEFEKDEDKSERKSKDKSKDDRKDKEKSKRSEDGVRRRGRSRDPDDRTRKSRSISPLKT
RSPKWSKRSKSPSPDRKTRKSRSRSPHRSHKKAKKSKH
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggcagatagaaaaggaaaacctgtcactacaatcaaaacactcacaaagaaagaacaa
gaagagctcaagaaaaaggaggaagaaaaagcagcagatgtttttgaagaattcttggca
tcatttgagaccaacgagaaaagcggagtgaaaacttttgtccgcgggggtattgtgaat
gcaactaaagaggaggaagcagcagaggtcaagaaaaataagctttatcgacctgctacc
aagtttgtcccggtgtcccagcatggctcgccagtatcatctgctgaaagcaaaaaggct
acatttaaaaaaaggtcagaagaaaagaagaagagtaatctcgaactcttcaaagaagaa
cttaagctaatacaggaagagcgggaggaaaggtataaaaggaagaaaagtgactctggt
ggtggtggaggaggatttggagaactggacacacctttatccggacggtcagcattatat
gatgacctgacagtgccaaccaccactaacctttacattagctgcattagcccaaagatg
aacgaggagattctctgcaaagagtttggtaagtatggtcccctggccagtgtgaagatc
atgtggccccgaacagacgaggagcgctgcaggacgtccaacagagcctttgtggctttc
atgacacggaaagatgcagagagagccttgtcttctcttgatggtaaagtgattatgggg
tttgaaatgaagcttggatggggtaaaccagctcggattccccctcagcctctctacaca
ccggtgggggtgagggccacaccgccacctccatctggtctccctttcaatgctcagcca
agagatcgcttccgcaatgacttcaccaagccgcttggtatgtccaaaggagagcttgac
aagactctgtccgaagccgtagtcaaagtggttatcccaaccgaaaggaatctattattc
ctcattcacaggatgatagagtttgtggtgcgtgaaggccccgtgtttgaagccgtaatt
atgaacaaggagaaaagcaatccagattacaagtttctttttgacaacaaaagccaagat
catgtgtactatcgctggaaactgttctccatcctgcagggacagtccccgacagagtgg
aggaccgcggactttcggatgttccggggaggctccatgtggagacccccgatcataaac
aactactctcagagaggggaagacagggaagacgtggaggaggatgttccccctgaggag
gaggtgaagagagggcagctcagagcggagcacaaacagaggctggatgcgttgcttaaa
gagctcacgccaagcagagaggatatcgccaacgccatgctgttctgtcttgagcgagcg
gatgcagccgaggaagtagtgggaaccatcactgaatctttttctttaattcagacgccc
cttcagaagaagattgccagattgtacctggtgtcggatattttgcacaattcatgtgcc
aaagtcgctggtgcatcgtattatcgtaaatattttgaaactaagctaacgcagatattt
ggagaccttaatgtagcgcataaaaacatacaagccaggcttcaggcagaacagtttaag
caaaaggttacaagttgttttagagcatgggaagactgggccatatacccggagccttat
ctaatccgacttcaaaacatctttctgggcctcgccaaagcagtggaggagttgacagag
acaacagaggacgtatcctcctttatctatggtgccccaatagacaaggcacccatagat
gggttacctttgcacagagctcctgtggatgacctggacggctgccccttaggctgggac
cctctggatggagtccctgttgatgacatagacggtgttcccttaggagttgccattgat
gacattgatggaatgcccttggaggagagcaacgttcctctctccagagtgcctttgtct
aagtgggaaaaggctactgatactgggacattttctcaagccaagactgagtcgaagtgg
gacatggtggtggagccaaacgttgaagaagaagtgactgtgagcgtcaactcacaggat
ggagatgaagactcacagagtgacagcagcgacgactccggcaggctgtccaaatacgag
agtgccgacttccagagctccctcaaaagttttcaaatgtctgagagcaaaaggaaacgg
ttgagagagctggaggtaaaggtcatgaagacccaagacgagttggaatccggcaagagg
tcgaggaagtctggaatgagcatacaacaacaagtggagcactacaggaacaagctgctc
cagaaggagtttgaaaaagacgaagacaagagtgagagaaaatctaaagacaagtcaaag
gatgacagaaaggacaaagagaagagcaaaagaagcgaagacggggtcagaagacgagga
cggagcagagatcccgatgaccggacacgaaaatcgaggagcatctccccgttaaagaca
aggtctcccaaatggtccaagcgttccaaatcaccatctccagaccggaagacgaggaag
tcgaggtcacggtcgccgcatcgctcccacaagaaggcaaagaagagcaaacactga
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