Anoplopoma fimbria (sablefish): 129113122
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Entry
129113122 CDS
T09102
Symbol
trpc4a
Name
(RefSeq) short transient receptor potential channel 4a isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129113122 (trpc4a)
Ion channels [BR:
afb04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129113122 (trpc4a)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
129113122
NCBI-ProteinID:
XP_054481246
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All DBs
Position
24:13456713..13475425
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AA seq
972 aa
AA seq
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MSQLYYRRTDSSSYRDRIPLRIVRAESELSPLEKAYLGAVEKGDYASVKQALEEAEIYFK
ININCIDPLGRTALLIAIENENLEIIELLLSFSVYVGDALLHAIRKEVVGAVELLLNHKK
PSGGMQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQKGVSMPQPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALSSPSLIALSSEDPFLTAFRLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELEMILNYRDDINLLEEEGNNDLARLKLAIKYHQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAGKFFTCVFLGLLYPMFALCYLIAPKSRHGLFIR
KPFLKFICHTASYLTFLFLLLLASQHIVTTEQNRQDRQGPAPTTVEWMILPWVLGFIWAE
IKQMWDGGFQDYVHDWWNLMDFVMNSLYLATISLKIVAYTKYSGSKPRNQWEMWHPTLVA
EAVFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQL
YFYYETKASDERGKCKGIRCVEQNNAFSTLFETLQSLFWSIFGLISLYVTNVDADHQFTE
FVGATMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGATLP
PPFNIIPSPKSFWYLICWIKRQVCKRTGSKRPETFGSLGRRAAENLRRNHQYQEVLRNLV
KRYVAAMIRDAKTEEGLTEENFKELKQDISSFRYEVMGMVKTGKPALQGAKASGSSSESS
LAYPNSSLKVSPAPQSSQGKSKVNRFKIIASILKQGGSTASPRPPEAFNGLPNGLLVSDD
SSSKSQRRNSPKDITDFGLFQKRHWSGNEATLGAGEVSREMYSLSEEAGESGGSDAEQQD
KEHQARVKDEKELLQSEKTEEAAANENDNVMNTNNSSDEGGKKETEEKDKESFSCGDSVA
GGCLSVSSREEA
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctgtactaccggcggactgacagctcctcgtaccgggaccgcatcccgctg
agaattgtgcgggccgagtcggagctgtcacctttggagaaagcctaccttggagctgtg
gagaagggagactatgctagtgtcaaacaggctctggaggaggcagagatctatttcaag
atcaacatcaactgcatcgaccctctcggccgcacggctctgctgattgccattgagaac
gagaacctggaaatcatcgaactcttgctgagcttcagcgtctacgttggcgatgccctg
ctgcacgccatccgcaaggaggtggtgggagctgtggagctgctgctaaatcacaagaag
ccgagtggtggcatgcaggttcctcctatcttattggacaagcagttctctgacttcacc
cctgacatcactcccatcatccttgctgcacacaccaacaactatgaaattatcaagctt
ctggtgcagaaaggtgtgtctatgccacagcctcatgaggtgcgctgtaactgtgtggag
tgtgtgtctagttcagacgtggacagcctgcggcactcgcgttcccgcctcaatatctac
aaagcgctgtcaagtccttctctaattgcgctctccagcgaggaccccttcctcactgcg
ttcaggctcagctgggagctgcaggagctcagcaaggtggagaacgagttcaaatcagag
tatgaggagctgtctcagcagtgtaaacagtttgccaaggacctcttggaccagacaaga
agctccagagagcttgagatgatcctcaactacagagatgacatcaacctattggaagaa
gagggcaacaacgacctggcaagactcaaactagctatcaagtaccaccagaaagagttt
gtagcccagccaaactgccagcagctgttggcgtcccggtggtatgatgagtttccgggc
tggaggcggcgccactgggccgggaagttcttcacctgtgtgttcctcggcctcctctac
cctatgtttgctctctgctacctcattgctcctaagagtcgccacggcctcttcatccgc
aagcccttcctcaagttcatctgccacacggcatcctacctgacctttctgttcctgctg
ctcctcgcctcccagcacattgtcaccacagagcagaacaggcaggacagacagggcccc
gcaccgaccactgtggagtggatgatcctgccctgggtgctgggattcatctgggcagag
atcaaacaaatgtgggatggtggtttccaagactacgtccacgactggtggaacctgatg
gactttgtcatgaactctctatacctggccaccatctccctcaagattgtagcctacact
aagtacagtggtagtaaaccgaggaaccagtgggagatgtggcacccaacacttgtagct
gaggcagtgtttgccatagcaaacattttcagttccctgcgcctcatctcgctgttcaca
gccaactctcacctggggccactgcagatctctctgggtagaatgctgctggacatcctg
aagttcctcttcatctactgtctggtcctacttgcgtttgctaacgggctgaaccagttg
tacttttactatgagaccaaggcctcagatgagagggggaaatgcaaaggcatccgctgt
gtggagcagaataacgccttctccacgttatttgagacactgcagtctctcttctggtct
atctttggtctgatcagcctgtatgtgaccaacgtggatgctgaccatcagttcactgag
tttgtcggcgccaccatgtttggcacctacaacatcatctccctggtggtgctcctgaac
atgctcatagccatgatgaacaactcctaccagcacattgctgatcatgcagacattgag
tggaagtttgccaggacaaagctgtggatgagttactttgaagaaggggccactctgcca
cccccgttcaacatcattcccagccccaaatcattctggtacctcatatgctggataaag
agacaagtgtgcaagaggaccggatccaagcgccctgaaacctttggaagtctcgggagg
cgagcagcagagaacctgaggagaaaccatcagtatcaggaggtgctgaggaacttggtg
aaacgttatgtggccgccatgatcagagatgctaagacagaggaaggcctgactgaggag
aacttcaaggagctgaaacaagatatctccagttttcgttatgaggtgatgggcatggtg
aagacagggaagcctgctctacagggggcaaaagccagtgggagctcatcagagtccagc
ctagcttaccccaactcctcgctcaaggtttctcccgccccccagagcagccaggggaaa
agcaaagtcaaccgtttcaagatcatcgcatccatcctcaagcagggcggttctacagct
tcacccaggccacctgaagccttcaatggtctacctaacggactcttggtctctgatgac
agctccagcaaaagccagaggaggaattcccccaaagatatcactgactttggcttgttc
cagaaacgccactggagtggaaatgaagccacattaggtgcaggagaggtttccagagaa
atgtactctttgtcagaggaggcaggcgagtccgggggctcagacgcagagcagcaggac
aaagagcatcaggcgagagttaaggatgaaaaagaactcctgcagtcagagaagacggag
gaagctgcagcaaatgaaaacgacaatgtaatgaacaccaacaatagctcagatgaaggt
gggaaaaaagaaaccgaggaaaaggataaagagagtttctcctgcggtgactcagtagct
ggtggatgtttgtcagtgtcgtccagagaagaagcataa
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