Anoplopoma fimbria (sablefish): 129113138
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Entry
129113138 CDS
T09102
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04080
Neuroactive ligand-receptor interaction
afb04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129113138 (gabra1)
04082 Neuroactive ligand signaling
129113138 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129113138 (gabra1)
Ion channels [BR:
afb04040
]
Ligand-gated channels
GABA-A
129113138 (gabra1)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
129113138
NCBI-ProteinID:
XP_054481273
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Position
24:9005240..9028183
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AA seq
461 aa
AA seq
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MCGRSRTAFLCLWAGLLVTNSVLAGKSSGQNGMTDEQKDNTTVFTKILDSLLDGYDNRLR
PGLGERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMAVLRLNNLMA
SKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAH
ACPLKFGSYAYTRAEVVYVWTRGAAQSVVVAEDGSRLNQYDLMGQSVDSGVVQSSTGEYV
VMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI
SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKK
ESLLKKNNTTAYPAATATSFAPNIARDPGLATIAKSAPPPPTEPKEEPKPKPPEAKKTFN
SVSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGMGPH
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggacggagcaggacggcctttctatgtctgtgggctggcttgcttgtcaccaac
agcgtactggctgggaaaagctctgggcagaacggcatgacagatgaacagaaagataac
actacagtgttcaccaagatcttagacagtcttctggatggctatgacaatcgcctcagg
ccaggactaggagagcgtgtaaccgaagtcaagactgacattttcgtgactagcattgga
cccgtttcggaccatgacatggagtacaccattgacgtcttcttcagacagagctggaag
gatgaaaggttaaagtttaaaggacccatggctgtgctgcgtctcaacaacctgatggcc
agcaagatctggacccccgacaccttcttccacaatggcaagaagtcggtggctcacaac
atgaccatgccgaacaagctgctgcgaattacagaggaaggcacactgctgtacaccatg
aggcttacagtaagagcagaatgccccatgcacctggaagacttccctatggatgcccat
gcttgtccactgaaatttggcagctatgcctacactcgagcagaggtggtgtatgtgtgg
accagaggggctgcccagtccgtggtggtggcagaggacgggtccagattaaaccagtac
gatctgatggggcagagtgtggattctggtgtggtgcagtccagcacaggagagtatgtt
gtgatgacaacccacttccacctcaagaggaaaattggctactttgtgatccagacatat
ctaccttgcatcatgacagtcatcctctcccaagtgtctttctggctcaacagagagtcc
gtccctgccaggactgtctttggagtgaccactgtcctgaccatgaccacactcagtatc
agcgccaggaactctctccccaaagtggcctatgccacagctatggactggttcatcgca
gtctgctatgccttcgtattctcggccctcattgagttcgccacagtcaactacttcacc
aagaggggttacgcctgggatggaaagagtgtggtaccagagaagcaaaagaagaagaag
gagtccctcctcaagaagaacaacactacagcttacccagctgccactgctacatccttc
gcccccaatattgccagggaccctggattggccactattgccaaaagcgccccaccaccc
ccaactgagcctaaggaggagccaaagcccaagcctccagaggccaagaagacctttaac
agtgtgagcaagatagacaggattgccagaatagccttcccactgctctttggaaccttt
aacttggtctactgggcaacttacttgaataagaagcccaaattgcaggggatgggtcca
cactaa
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