Anoplopoma fimbria (sablefish): 129113214
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Entry
129113214 CDS
T09102
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
129113214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129113214
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129113214
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129113214
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf_RING_Vps8_fungal
PA
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
129113214
NCBI-ProteinID:
XP_054481390
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All DBs
Position
24:24756030..24834006
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AA seq
820 aa
AA seq
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MTVPQRLLAGLWPWLLMAALQVVLGQPGLEAERPVLRAVIKVALLNPEPAGKPLTLKGVF
VRGSEGYAEGKLMQYHPLSLCNTSEDERQENDFITIVKLEHRVPRCLPLLDKARMALDKG
AQAVIFDVSDDANAAAEVTAKTGSLPCPVVLVEAEDAEELMGLVNKNEEAKVRIEIRVEP
HRWPHYDVGILLTIVLAILTIVLIFAFRYKCKSNRTWDSVHQQTMQAISRLETTTYSSQG
CSGSQRQRAAWGSASSSNSSPVCAICLDDFQDGQHLRIISCAHEFHKDCVDPWLLQHRTC
PLCMHNIMGTERQPQRNRLQQSPEQSQGFLHPQSYSSPRNHPFPQHAIPFSMRPHYPRGP
SGPYPSLGHYTGPSAVEPQTLHFLASRPLAPGCGYHLPAEGPGRPHRIGGNCRTSTHHYT
PRRSCQNYRSSCAAQRSASSSRLHHPAPVTPQPRGAPAHSRQDDGSCSGGSYHTERSGYL
ADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYYGPGSGCA
PRRSSLEAGAQARPRSLDSVVNKAGCPEEQPQTVFSHIHYHRHRHHHYEEGEHSQGPSRG
SDEEQGAAAAAAAAPAALVLERDSPVCPPKHSPCQCPKPDPTDRPSPGTECQDHDPSNPT
GPSVRMSSIPVQLQPHCCHQGHGHPPAPLGRVGGCVHDGPSVRFHQSLDLQDDRSIHIHY
GQGPGFCCSPPELHPALLPVPLILDSGGMEDWPCYTGAHVVWQKRVQQARSEPQLLGPGT
PMDRPPCRFHHGPVADRNTDICLYCQTLHHNQGSEEESGV
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcccgcagcggctcctggccgggctctggccgtggctgctcatggcggccctg
caggtggtgctgggccagccgggcctggaggccgagcggccggtcctccgagcggtcatc
aaggtggccctgctgaaccccgagccggcggggaagcctctcactctgaagggggtgttc
gtgagaggaagcgaaggctacgcggaggggaaactcatgcagtatcaccctctgtctctg
tgcaacacaagcgaggatgaacgacaagagaatgacttcatcaccatcgtcaaactggag
cacagggtaccccgctgtctgccgctgctcgataaggcccgcatggcgttggacaaagga
gctcaggccgttatctttgatgtcagtgatgatgccaatgctgctgctgaggtgactgcg
aaaacgggctccctcccatgtccagtcgtactggtggaggcggaggacgcagaggagttg
atgggtctggtcaacaagaacgaggaggccaaagttcgtatcgagatcagggtggagccg
cacagatggccacattatgatgtgggtatcctgctcaccattgtcctcgctattctgacc
atcgtccttatctttgccttccgctacaagtgcaagtccaacaggacctgggactctgtc
catcagcagaccatgcaggccatcagtcgactggagaccacaacctacagctcccagggc
tgctcgggctcccagcgccaacgtgcagcctgggggtcagccagcagctccaactccagc
cccgtctgtgctatctgcctggatgacttccaggacgggcagcatctgaggatcatctcc
tgtgctcatgagttccacaaagactgcgtcgacccctggctgctgcaacaccgcacctgt
cccctctgcatgcacaacatcatggggacggagcggcagccccagaggaaccgactccag
cagagtccagagcaaagtcaaggtttcctgcaccctcagtcttacagcagcccacggaac
caccccttcccccagcatgccatccccttctctatgaggccccactatcctcgcggaccc
tccggaccttatccctcgctcggccactacaccggcccttctgccgtggaaccacaaaca
ctgcacttcctcgccagcaggccgcttgcgcccggctgtgggtaccaccttcctgcagag
ggtcccgggaggccccacaggattgggggtaactgtaggacctccacgcaccactacacc
ccccgtcggtcctgccaaaactatcgctcatcctgtgcggcgcagcgcagtgcgtccagc
tcaagactgcaccaccccgcccctgtcacgccacagccccgtggagcgccagcccacagc
aggcaggacgacggcagctgctcaggtggcagctaccacacggaacgcagcgggtacttg
gccgacgggccggccagtgactctagctcggggccctgccacggctcctccagcgactct
gttctgaactgtaccgacgtgtccctgcaaggggtttatggcagctggtccaccttccgt
agctctctgagcagtgactacgatccgtttgtgtactatgggccaggttctgggtgcgcc
ccccgcaggagcagcctggaggcaggcgcccaggcccggcccagatctctggattctgta
gtgaacaaagcaggctgccccgaagagcagccgcagactgtgtttagccacatccactac
caccgccacagacaccaccactatgaggagggggagcacagccagggcccgagcagaggc
tcggacgaggagcagggggccgctgctgctgctgcagctgcacctgctgctcttgtcctt
gaaagagactcgcctgtctgccctcctaagcatagcccctgccagtgcccaaagccagac
cccacagataggcccagtcctgggacagagtgccaggaccatgaccccagcaaccctacg
ggaccttctgtacggatgtcctcgatccctgtacagcttcaaccccactgctgccaccag
ggacacggacaccctcccgctcctctcgggcgagtgggtggctgtgtgcatgatggcccc
tcggttcgcttccaccagagcctagatctgcaggacgaccggagcatccacatccactac
ggtcagggcccgggcttctgctgctcgcctccagagctgcaccctgcattgctccctgtg
cccctcattctggactctggaggtatggaggactggccttgctataccggggcacatgta
gtttggcaaaagcgggtgcagcaggcccgctcagagccccagctcttggggccggggacc
cctatggacaggcccccctgcaggttccaccatggccctgttgctgaccgcaacacagac
atttgtttgtactgccaaacattacaccacaatcagggatcagaagaggagtctggtgtg
tga
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