Anoplopoma fimbria (sablefish): 129113233
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Entry
129113233 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor 1-like
KO
K05197
glutamate receptor 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04080
Neuroactive ligand-receptor interaction
afb04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129113233
04082 Neuroactive ligand signaling
129113233
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129113233
Ion channels [BR:
afb04040
]
Ligand-gated channels
Glutamate (ionotropic)
129113233
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF2061
Motif
Other DBs
NCBI-GeneID:
129113233
NCBI-ProteinID:
XP_054481423
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Position
24:complement(326361..376204)
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AA seq
899 aa
AA seq
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MLLLLLLLGLCSGTSFPSNIHIGGLFPTGSHEYEVFRFALAQQQDVPKLVPQVDMVDTGS
SFAMTYAFCSQFSKGVYAIMGLYDRRTVNMLMSFCGSLHVCFVTSSFPVQTNNQFVLQLR
PQLQEPVMALLEHFYWTRFVYMYSADSGLSVLQRILDTAAERTWQVTSVNLDTLTEAAFV
KLLTDIDFKKDFQIVIDCELERLNSILNVIAAQKRNLKNYHYILASLGFMDLNMTEFQKL
GPNVTGLQLVNWSDPAVEKMDQDWLDFDSKDLKLARRRLRFTGALTYDGVSVMATAFQNL
RRQRIDISRRGNAGECLANPPAPWGQGIDIQRALQQVRLDGLTGRVQFDERGHRTNYTLS
VMELSHTGSRKIGYWNERRGYVNTAVYKPPLEEFHGLQNRTYVVTTILEAPYMMLKKNHE
QFEGNERYEGYCAELAAEIAKHVGFVYRLELVGDGKYGARDAETTMWNGMVGELVYGKAD
VAVAPLTITLVREQVIDFTKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWMCIVFAY
IGVSVVLFLVSRFSPYEWKGFSQTQNQQKEKETPEHSNDFGIFNSLWFSLGAFMQQGCDI
SPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIEGSEDLAKQTEIAYGTLD
GGSTKEFFRRSKIAVFEKMWSYMRSADPTVFVKNTNEGVIRVRKSKGKYAYLLESSMNEY
IEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNPVNLAVLKLNEQGLLDKLKNRWWYDKG
ECGTXGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALVEFCYKSRIESRRMKVGSGL
EQSPAPRTQTVQSQRGGGASSGLRGENGRVVTHDFPKSGAQGLPCMSKAASMGLSSTGM
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctgctgctgctgctcgggctctgcagcggcacaagtttcccgagtaacatc
cacataggaggcctcttccccaccggctcccatgagtacgaggtgttccgcttcgctctg
gctcagcagcaggacgtccccaaactggtcccacaggtggacatggtggacactgggagc
agcttcgccatgacctacgccttctgctcccagttctctaaaggcgtgtacgccatcatg
ggtctgtacgaccggcggaccgtcaacatgttgatgtcgttctgcggttctcttcacgtc
tgcttcgtcacctcgtccttcccggttcagaccaacaaccagttcgtccttcagcttcgt
cctcagctccaggagcccgtcatggctctgctggagcacttctactggacccgcttcgtc
tacatgtacagcgccgactcaggtctgtcggtgctgcagaggatcctggacacggcggcg
gagcggacctggcaggtgacctccgttaacctggacacgctgacggaggccgccttcgtc
aagctgctgaccgacatcgacttcaagaaggacttccagatcgtcatcgactgtgagctg
gaacgactcaactccatcctcaacgtgattgctgctcagaagagaaacttgaagaactac
cactacatcctggccagtctgggcttcatggacctgaacatgacggagtttcagaagctg
ggtcccaacgtgacgggcctccagctggtgaactggtctgatcccgctgtggagaagatg
gaccaggactggctggacttcgacagcaaagacctcaaactggcccgcaggaggctccgg
ttcaccggagctctgacctacgacggcgtcagcgtcatggcgacggccttccagaacctg
cggcggcagcgcatcgacatctctcgccgtggaaacgcaggtgaatgtctggcgaacccg
ccggccccctggggacaaggcatcgacatccagagggctctgcagcaggtgcgtctggac
gggctgacgggtcgagtccagtttgacgagcgaggacatcggaccaactacaccctgagt
gtgatggagctcagccacaccgggtccaggaagatcggctactggaacgagaggcggggc
tacgtgaacacggccgtctacaagccgccgctggaggagttccacgggctgcagaaccgg
acctacgtggtcaccaccatactggaagccccctacatgatgctgaagaagaaccacgag
cagttcgaagggaacgagcgctacgagggctactgcgccgagctggcggccgagatcgcc
aaacacgtgggcttcgtgtaccgactggagctggtgggggacgggaagtacggagccaga
gacgcagaaaccaccatgtggaacggcatggtgggagaactggtgtacgggaaggctgac
gtggccgtggcgccgctcaccatcaccctggtgagggagcaggtgatcgacttcaccaaa
cccttcatgtctctggggatctccatcatgatcaagaaacccaccaagtccaaacccgga
gtgttctccttcctggacccgctggcctacgagatctggatgtgcatcgtgttcgcctac
atcggagtcagcgtggtgctgttcctggtgagtcggttcagtccgtatgaatggaaaggg
ttctctcagactcagaaccagcagaaggagaaggagactccagaacactccaacgacttt
gggatctttaactctctgtggttctctctgggagcgttcatgcagcagggctgtgacatc
tcacccaggtctctctcaggtcgtatcgtgggaggagtctggtggttcttcaccctcatc
atcatctcgtcctacacagccaacctggcggccttcctcaccgtggagaggatggtgtcc
cccatagagggctccgaggacctggccaagcagacggagatcgcctacggtactctggac
ggaggctccaccaaagagttcttcaggaggtcaaagatcgccgtctttgagaagatgtgg
tcgtacatgcggagcgccgaccccacggtgttcgtcaagaacaccaacgagggcgtgatc
agggtgaggaagtctaaagggaagtacgcctacctgctggagtcctccatgaacgagtac
atcgagcagaggaagccctgcgacaccatgaaggtgggaggaaacctggactccaaaggg
tacggagtggccacgcccaaaggatccgccctcagaaaccccgttaacttggcagtgtta
aaactgaacgagcagggcctgttggacaaattgaaaaacagatggtggtatgacaaggga
gagtgcggcaccnggggaggggactccaaggacaagacgagcgcgctcagtctgagcaac
gtggccggcgtgttctacatcctgattggaggactgggactcgccatgctggtggctctg
gtcgagttctgctacaagtcccggatcgagtccagaaggatgaaggtgggttctggtttg
gaacagagtcccgcccctcgaacacagactgtccaatcacagcgaggaggaggagcgtca
tcggggctccgaggagaaaacggacgagtggtgacgcatgatttcccaaaatccggagct
caaggtttaccgtgcatgagcaaagctgccagcatgggactctcctccacaggcatgtga
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