Anoplopoma fimbria (sablefish): 129113323
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Entry
129113323 CDS
T09102
Symbol
taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129113323 (taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afb03021
]
129113323 (taf6)
03036 Chromosome and associated proteins [BR:
afb03036
]
129113323 (taf6)
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129113323 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
129113323 (taf6)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
129113323 (taf6)
STAGA complex
129113323 (taf6)
TFTC complex
129113323 (taf6)
SAGA complex
129113323 (taf6)
SLIK complex
129113323 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CENP-S
CBFD_NFYB_HMF
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
129113323
NCBI-ProteinID:
XP_054481524
LinkDB
All DBs
Position
24:complement(15738686..15744296)
Genome browser
AA seq
638 aa
AA seq
DB search
MAEERRQKQCSVSLPTESMKAMAESVGVGQLQEESCAALSEEVSYRIKEIAQDALKFMHH
GKRRKLTTSDIDSALKLKNVEPLYGFQSQDFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIEGVQPSIPENPPPAPKEQQKVESTEPLKVVKPGQEEEGTIQG
KGQGATSADAKGKDKGLIRLKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIAT
DPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAV
VTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSWLDEKT
QWTTRYGCIAGLSELGPDVIKTLILPRLTVEGARIKSVMEGPVVSNIDKIGADHVQSLLL
KHCASVIAKIRPQPDNVEQYRTDYGYLGPMLCSHVMKARTQAALQAQQVNRTTLTITQPR
PTLTVSQSGLSGSAGPRTPSIIKVPSSLTLMSPRPGTPSQPSPPATKYIVMATSAGTAST
QQVITLSSSQSASPVTSTVPSATSTLQPLVKLESGSGPGLTGSRPMQKYIVVSLPSSASS
SLETKSSVLPTSISSNPLEAAMKLDRSESPGASTQSPH
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaacgtcgacagaagcagtgttcggtctccctgcccacagagtccatgaag
gccatggcagagtctgtgggagtggggcagttacaggaggaaagctgtgcagccctaagt
gaagaagtcagctacagaataaaagaaattgcacaggatgctctcaaatttatgcatcat
gggaagagacgtaaattaaccaccagtgacatagatagtgctctcaaactaaaaaacgtg
gagccactgtatgggttccagtcgcaagacttcatcccttttcgctttgcaagtggtggt
ggaagagagcttcatttctatgaggaaaaggaagtcgacctcagtgacattattaacaca
cctctcccaagagttccactagatgtgtctctcaaagcccattggttaagcattgagggg
gtgcagccttctattccagaaaatccaccaccagcaccaaaagagcagcaaaaggtggaa
tctacagagccgctcaaagttgtcaaacctggtcaggaggaggaaggtacgattcagggc
aaaggtcagggggcaacttctgctgatgccaaaggaaaggataagggtctaataaggttg
aagccgcgcagcactcatgagctgtctgtcgaacagcagctctactacaaggaaatcaca
gaagcgtgtgttggctcctgtgaggctaaaagagctgaagctctacagagtattgccaca
gatcctggactgtatcagatgcttccaagattcagcacattcatttctgaaggagttcgt
gtgaatgtggtgcaaaacaacttggccctgctgatttatttaatgcggatggtcaaagct
cttatggacaaccccaccctgtatttggagaaatacctgcatgagctcatcccagctgtg
gtgacttgtattgtgagtaagcagctgtgtttgcgaccagatgttgacaaccactgggct
ctacgagactttgctgctcgcctcatggcccaaagttgtaaaaccttcagtactacgacc
aacaacatccagtcccgtattaccaagacctttactaagagttggctggatgaaaaaacg
cagtggaccacacgttacggctgcatcgctggactttctgaactaggacctgatgtgatt
aagacgttgatccttcctcggcttactgtagagggtgctcgcatcaaatcagtgatggaa
ggaccagtggtctccaatattgataagataggagctgaccatgtccaaagcctcttactg
aaacactgtgcaagtgttattgccaagatccgacctcagcctgacaacgtggaacagtat
cggaccgactatggttaccttggaccaatgctttgctcccacgtaatgaaggccaggact
caagcagcactgcaagctcaacaagtcaacagaaccacattaacaatcacacagcctcgt
ccgacccttactgtgtcacaaagtgggttaagtgggtcggcaggaccgcgcactcccagc
atcattaaagttccaagctccctcaccctgatgtctcctcgaccagggaccccatcacag
ccatctcccccggcaacaaaatacatcgtcatggcaaccagtgctggaaccgcctcaact
cagcaggtcatcaccctcagctcttcccagtcagcctcaccagtcaccagcactgttccc
agtgccacttcgaccttgcagcctttggtaaaactggagtctggcagtggccctggactg
accggttcacgacctatgcagaagtacatagttgtatctctgccctcgtctgcctcgtcc
tctttggagactaagagctctgtgctaccaacctcaatttcctcaaacccgctcgaagca
gcgatgaagctagaccggtctgagtctcctggagccagcacacagtcgccacactga
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