Anoplopoma fimbria (sablefish): 129113336
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Entry
129113336 CDS
T09102
Name
(RefSeq) guanine nucleotide exchange factor VAV3-like isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04510
Focal adhesion
afb04517
IgSF CAM signaling
afb04519
Cadherin signaling
afb04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129113336
04519 Cadherin signaling
129113336
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129113336
09142 Cell motility
04810 Regulation of actin cytoskeleton
129113336
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Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
SH3_2
SH3_1
CH
SH2
SH3_9
SOS1_NGEF_PH
C1_1
PH
RHG20_PH
CDC24
LZ3wCH
SRA1
Filamin
FaAP_C
zf-HYPF
C1_2
Motif
Other DBs
NCBI-GeneID:
129113336
NCBI-ProteinID:
XP_054481547
LinkDB
All DBs
Position
3:18881236..18926142
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AA seq
835 aa
AA seq
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MEYWRQCAMWLISCNVLPANHRVIADTAQVFDLAQTLRDGVLLCQLLNNLRSATINLKEI
NLRPQMSQFLCLKNIRTFLTSCCEVFGMKKKDLFEAFDLFDVRDFGKVMDTLSKLSYTAV
AQQGGIKPFPTEESLKDEDIYNNLEDLIDENAPDDEDDLYAAVYGLEEDYAGGEIYEDLM
RNEQHPPLPAEVDVRSCCLSEIKQTEEKYTETLESIEKYFLNPLRNFFSAAEINKVFVNI
PDLVKVHKSLMVDVQDSILNKNALNLYQIFISYKERLLIYGIYCSQVEIAIAVLDLICKE
KEDVRLKLEECSKRANNGKFTLRDLLVVPMQRVLKYHLLLQELVKHTHDAADKSNLKIAL
DAMKDLAQFVNEVKRDNETLREIDQYQRSIENLNQPLISYGRPKGDGEVRMVSSVDKKKQ
DRHIFLFDVAVIVCKRRGDNYEMKDILDLNNFKITNNPTSDREGKKWCYGFYVTHQQGHA
GFELFFKTGELKKKWLDQFEMAISNIRPEKANHNTHQFMMHTFERITSCSSCHLLLRGIF
NQGYRCLKCGLGAHKECLGRLGICGRTDAAKPKPKENTTPPDPGLPRMVVIRDYSGIPCP
QCGPPLSIHAGDVIELMFADLHSSWWQGKILATSKIGFFPSDAVRPCPCVPKPVDYSAQL
WFAGPMERYQAEVELLDRENSTYLVRHRSKECTEYAISIKFKDKVKHIKILTKDCCFYIA
ESRLFKTVQDLVDYYKQHSLKEGFSSLDTTLQLPYRELSNGSMPKAITRAGSVFSPRVVG
VAVARYDFCSRDTRELSLLQGDNIKIYTKMSNGWWKGEIDGRMGWFPSTYVEEED
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggagtactggaggcaatgtgcgatgtggctgatcagctgcaacgtgctgccagccaac
caccgggtgattgcggacacggcgcaagtgttcgacctggcgcaaaccctgcgggacggg
gtgctgctttgccaacttctgaacaacttgagatctgccactatcaacctgaaggagatc
aatctcaggccacagatgtcacagttcctgtgcttgaagaacatccgtacattcctgact
tcttgctgtgaggtgtttgggatgaagaaaaaggatttatttgaagccttcgacctcttt
gatgttcgagactttggaaaggttatggatacactatccaagctttcctacacagcagtt
gcacagcaaggaggaatcaagccatttccaacagaggaaagcctcaaagatgaggacatt
tacaataatctggaagacttgattgatgagaatgcccccgatgatgaggacgacttgtat
gcagcggtctacgggctggaagaagactacgcaggtggagagatctatgaagacctcatg
aggaatgagcagcatccccccttgccggcagaggtggatgtccggagctgctgcctctca
gagatcaaacagacggaggagaaatacacagagaccctggagtcaatcgagaagtatttc
ctgaaccctctcaggaattttttctccgctgctgaaatcaacaaagtttttgtcaacatt
ccagacctggttaaagttcataagagcctgatggtcgacgtgcaggactccatcttaaac
aaaaatgccttaaatctctaccagattttcatcagctacaaagagagactgctcatttat
ggtatatactgcagtcaggtggagatcgccatcgctgtgttagacctcatttgcaaagag
aaagaggatgttcgtctaaagctcgaggagtgctcaaagagagccaacaatgggaagttt
actctgagggacctgctggttgtcccgatgcagagagtcctcaagtaccacctacttctt
caggaactagtcaaacacactcacgatgctgctgacaagagcaacttgaagattgctctt
gatgccatgaaagacctggctcagtttgtcaacgaggtgaagagagataatgagacactg
agggagatcgaccagtaccagaggtctattgaaaacctgaatcagcctctaatcagctac
ggtcgaccaaaaggtgacggagaggtgcgcatggtctccagtgttgacaagaagaaacag
gacagacacatatttctttttgatgtggctgtcattgtttgcaagaggagaggagacaac
tatgagatgaaggacatccttgacctcaacaacttcaagatcacaaacaaccccaccagc
gacagagagggtaaaaagtggtgctacggcttctacgtgactcaccagcagggacacgcc
ggctttgagctcttttttaagaccggagaactgaagaagaagtggctggatcagtttgaa
atggccatatcaaatattcgaccagagaaagccaaccacaacacccaccagttcatgatg
cacacctttgaaaggatcacttcctgtagttcctgccacctcttgctcaggggcatcttt
aaccagggttaccgctgtctgaaatgtgggctgggggctcataaggagtgtctgggtcga
ctgggaatctgtgggagaacagatgctgccaagccgaaacccaaggaaaacacaacacca
ccagacccaggtttacccaggatggttgtgatcagagactacagtggcatcccttgtccc
cagtgtgggcccccactaagcattcatgcgggggatgtcattgaactgatgtttgccgac
ctgcacagctcctggtggcagggaaaaattctggcgacaagcaagattggcttctttcca
agtgacgctgtgaggccttgcccatgtgttccaaaacctgtcgattactcggcccagctc
tggtttgcaggtcctatggagagataccaggctgaggtggagcttctggaccgagagaac
agcacctatctggttcgacacaggagtaaagagtgcactgaatacgccattagtataaag
ttcaaagataaagtcaagcacattaagattctgaccaaggattgctgcttttacatcgct
gagagtcggctgttcaagactgtgcaggacttggtggattactacaagcagcattcattg
aaggagggtttcagcagtcttgacaccactctgcagttgccctatagggagctgtccaat
ggaagcatgcccaaggccattaccagggctggcagtgtgttttctcccagggtggtgggt
gttgcagtggcacgttatgacttctgctccagagacacacgggagctctccctgctgcag
ggagacaatatcaagatctacaccaagatgtccaacgggtggtggaagggagagatcgat
ggcaggatgggctggttcccctcgacctacgtggaagaagaggactga
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