KEGG   Anoplopoma fimbria (sablefish): 129113365
Entry
129113365         CDS       T09102                                 
Name
(RefSeq) lissencephaly-1 homolog B
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb00565  Ether lipid metabolism
afb01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:afb00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    129113365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:afb03036]
    129113365
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:afb04147]
    129113365
Chromosome and associated proteins [BR:afb03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    129113365
Exosome [BR:afb04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   129113365
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 NBCH_WD40 Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_EML Beta-prop_Nup120_160 WDR90_beta-prop_4th LisH LisH_PAC1 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_DCAF12 eIF2A Beta-prop_WDR35_TULP_N Nucleoporin_N Beta-prop_NUP159_NUP214 Pox_A_type_inc Beta-prop_WDR11_2nd ARMC9_LisH SutA-RBD LisH_2 DUF2570 LisH_WDR26
Other DBs
NCBI-GeneID: 129113365
NCBI-ProteinID: XP_054481578
LinkDB
Position
24:complement(14792097..14805668)
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDMNEEVDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEMTHGGPVGQKRDPKEWIPRPPERYALSGHRAPVTRVIFHPVF
SVMVTASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMSIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGSLIASCSNDQTVRVWVVASKECKAELREHEHVVECIAWAPDTAHPTILEATGSE
SKKSGKPGPFLLSGSRDKTIKMWDVSIGICLMTLVGHDNWVRGVLVHPGGRFIVSCADDK
TLRIWDYKNKRCMKTLCAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcacagagacaaagagatgaactaaaccgggctatagccgattatctccgt
tccaatggatacgaggaggcttattccaccttcaagaaagaggccgagttggatatgaat
gaagaggtagataaaaagtatgcaggccttttggaaaagaaatggacttcagtcatcaga
ttacagaagaaggtgatggagctggaatcaaagttgaacgaggcaaaggaggagatgaca
cacggtggacctgtgggtcagaagagagaccccaaggagtggatcccccgtcccccagag
agatacgccctgagcgggcaccgcgctccggtcacacgtgtcatattccaccccgtcttc
tctgtgatggtcacagcctccgaggatgctaccatcaaggtgtgggactatgaggcaggg
gactttgagcgaaccctaaaaggccacacagattctgtgcaggacatctcctttgaccag
acgggaaagctgctggcttcgtgttcggctgacatgagcatcaaactttgggactttcag
gggtttgagtgcatccgaacaatgcatggccacgatcacaatgtgtcgtccgttgccatc
atgccaaatggtgaccacatagtgtcggcctccagagacaagaccatcaagatgtgggag
gtggccactgggtactgtgtgaagacatttacaggccacagggaatgggtgaggatggtg
cgtcccaaccaggacggctcgttgattgccagctgctccaacgatcagacggtgcgtgtc
tgggtggtcgcctcgaaggagtgcaaagctgagttgcgggagcacgaacatgtggtagag
tgtatcgcctgggcccctgacactgctcaccccaccatcctggaggccacaggctcagag
agcaagaagagtgggaaacctggccccttccttctctccggatctagagacaaaacaatt
aagatgtgggacgtcagcattggcatctgccttatgactctggtgggacacgacaactgg
gtgcgtggggtgttggttcatcctggaggaaggttcatagtgagctgtgctgatgacaaa
acccttaggatctgggactacaagaacaaacgctgcatgaagaccctgtgtgcccatgaa
cacttcgttacctctctggatttccacaagactgctccctacgtggtgacgggcagtgtc
gatcagacagtcaaagtctgggagtgccgctga

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