Anoplopoma fimbria (sablefish): 129113381
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Entry
129113381 CDS
T09102
Name
(RefSeq) cytotoxic and regulatory T-cell molecule isoform X1
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129113381
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afb04515
]
129113381
04090 CD molecules [BR:
afb04090
]
129113381
Cell adhesion molecules [BR:
afb04515
]
Immunoglobulin superfamily
Nectin family
129113381
CD molecules [BR:
afb04090
]
Proteins
129113381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
I-set
V-set
Ig_2
C2-set_3
C2-set_2
V-set_CD47
C1-set
Adeno_E3_CR1
Pox_C7_F8A
Motif
Other DBs
NCBI-GeneID:
129113381
NCBI-ProteinID:
XP_054481606
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Position
24:20260044..20266852
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AA seq
493 aa
AA seq
DB search
MELKLQLSVFLLLIQVSLAVWQRVTVYEGQTLSLSCPVANAHMTHVDWKNPEGYIMFFNR
NQALKDKRYSINNLSQSEFNISISNITFKDGGNYTCTQYSALTTEKKVEVTVIGRPKMEK
AVHEGTFVIKCTAEGNHYPPQISWKLDNGPEILAHDQQEVRKYEDKKYVSMDILHIHSVK
NRITVKCLVRNRAQHSQPLMNFVKIGPKSTKSRGTTTTSSPTTHLRGSTEGPGTTTGWFR
PGRTTVNHATREVKGPSSESSIMLSTAPSNQLFSSNEPQTVTAPGGRPLVPVTSTGSHLS
TSDDSTISVVSGSTMRRNDTVSNATSTADWTSVSETTEEITSNNSTEGNRTGSFDDPNMR
TGTGGSSSLLVFLVTCLIFGLLVVVIFFAIKLRRAHIAWKKVFIVTENEDTDPSEESSKS
KSSQEERNAQGQRRRGLFNTAFTQYDVEKPTVISSVINTNAKVAEESENKEQSSEPQTLG
QTLAKCDIKETEL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaagctgcagctcagcgtcttcctgttactcatacaggtttcacttgcagtg
tggcagcgtgtgactgtgtatgaaggtcagacactcagcttaagctgcccagttgctaat
gctcacatgacccatgtcgactggaagaaccctgaaggatatattatgttttttaatcgc
aatcaagctttgaaggacaagcgctacagcatcaacaatctgtctcagtcagaattcaat
atcagtatttccaacatcaccttcaaagatggaggcaactacacatgcactcagtacagc
gctctaacgacagagaagaaagtggaggtgacagtgataggccgacccaaaatggaaaaa
gcagtgcatgaaggaacgtttgtcataaaatgcactgctgaagggaaccactatcctccc
cagatctcctggaaattggataatggacctgaaattcttgctcatgaccaacaagaagtt
agaaaatatgaagataagaaatatgtctcaatggatatactacacattcactcagtgaag
aacaggatcactgtcaaatgccttgttcgcaatcgagctcagcactcacaaccactgatg
aactttgtcaaaattggaccaaaatcaacaaagtcccggggcacaacgacaaccagttcc
cccacaacccaccttcgagggtcaacagagggcccaggaacaacaaccggctggttcaga
cccgggagaacaacagttaaccatgcaaccagagaagtgaaggggccgtcatcagagagc
tctataatgttatcaactgctccctccaatcagctgttttcctccaatgagccacagaca
gtcacagcacccggtggacgtcctctggtccctgtgacatccacaggctcacatctcagc
accagtgatgactcaacaatctctgtggtatcaggctcgaccatgaggaggaatgacacc
gtcagtaatgcaacaagcacagcagactggacatctgtctccgaaactacagaagaaatc
acatccaataacagtacggagggaaacagaacagggagctttgatgacccaaatatgcgg
acaggaaccggaggaagttcatcattgctggtattcctggttacatgcctgatctttggt
ctcctggtggtcgtcattttctttgccatcaagctgaggagagcacacatcgcctggaag
aaagtttttattgtcacagagaatgaggacactgatccatcagaggagagcagtaaatcg
aaatcaagccaggaagagaggaacgcccaaggacagaggcgaagagggctcttcaacacg
gcattcacacagtacgacgttgaaaaaccaacagtgattagctcagtgataaacacaaat
gcaaaggtagcagaagagagtgaaaataaagagcagtcttctgaacctcaaaccctggga
caaactctagccaagtgtgacataaaagagacagagctatga
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