Anoplopoma fimbria (sablefish): 129113415
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Entry
129113415 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: RING finger protein 145-like
KO
K23789
E3 ubiquitin-protein ligase RNF145 [EC:
2.3.2.27
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129113415
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129113415
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129113415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRC8_N
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_11
zf-RING_5
zf-ANAPC11
Rtf2
Prok-RING_4
zf-P11
Motif
Other DBs
NCBI-GeneID:
129113415
NCBI-ProteinID:
XP_054481661
LinkDB
All DBs
Position
24:complement(15233920..15246439)
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AA seq
767 aa
AA seq
DB search
MAVKDRVEAVLNVGLRVPSIMLLDVLYRWDVSSFFQKIQRSSLSNNPLFQYKYLALYLHY
VGYILSLVLLTLPRQHLVKLYLYVLTALLLFAGHQVSRDYVRSELESGHEGPVYLEPLCM
NRFTTALIGQLVVCTLCSCVMQTKRIWLFSAHLLPLVARLCLVPLETIVFINKFSMIFTG
LEVIYFLASNLLVPYNLAKTAYRELAQVVEVYGLLALGMSLWNQLVLPVLFMCFWLLLFA
LQIYSYFSTRDQPTSRERLLFLFLTSIAECCSTPYSLLGLVFTVSFIALGVLTLCKFYLQ
GYRAFMNDNTMHRGMTEGITLLILAVQTGLIELQVIHRAFLLSIILFIVVASILQSMLEI
ADPIVLALGASRDKSLWKHFRAVSLCLFLLIFPAYMAYMICQFFHMDFWLLIIISSSILT
SLQVLGTLLIYILFMVEEFRKAPVENMDEVIYYVNGTYRFLEFLVAVCVVCYGVSETVFG
EWSVMGSTIILVHSYYNVWLRAQLGWQSFLLRRDAVNKIKSLPTASNTQLEQYNDICAIC
YQDMNNAVITPCSHFFHAGCLKKWLYVQETCPLCHSQLKSQSPTTTQEAPAANQIPAGQE
EAPVDKKLKDDAPPDDAKKEGAAEQEGDNEPTTSAGKSSSSSSSSSSSSSGVPSTPQHLA
ETPSSSSSPPPLTESQKQSLTDQPSSSSASSSATMDLPPSPPSPSHVSSSSQPPAQAAMN
PAEPEPSPQLNRGFLLGSKESPPAPSSHLMDPPPPLHEEQSPPPCSL
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgaaggaccgtgtagaggcggtgctcaatgtgggcctgcgtgtccccagcatc
atgctgctggatgtcctgtaccgctgggacgtcagctccttcttccagaagatccagcgt
tccagcctgtccaacaaccccctgttccagtacaaatacctggcactatacctgcattac
gtaggttacatcctgagcctggtactcctgactctgcctcgtcagcacctggttaaactc
tacctgtatgtgcttacggcccttctgctgtttgctggtcaccaagtctcaagggattat
gtccgcagtgaactggagtccggccatgaaggacctgtctacctggaacctctctgcatg
aacagattcaccactgcactcataggtcagctggtggtgtgtaccctatgttcctgtgtg
atgcagaccaagaggatttggcttttctctgctcacctcctccccctggtggccagactg
tgtctggtcccactggagaccattgtcttcatcaataagttctccatgatcttcacaggc
ctggaggtcatttacttcctggcttctaacttgttggtaccgtataacctggccaagacc
gcctacagggagctggcccaggtggtggaagtgtatgggctgcttgctttgggtatgtct
ctatggaaccagctggtccttccagtactcttcatgtgtttctggctgctgcttttcgca
ttgcagatctactcttacttcagcaccagagaccagcctacctcaagggagaggctcctt
ttcctctttcttaccagtattgcagaatgttgtagtacaccatactcccttttgggtctg
gttttcaccgtctctttcatcgctctgggtgttctcacgctctgcaagttctacctgcaa
ggctacagagcctttatgaatgacaacaccatgcacagggggatgacagaaggcatcacc
ctgctgatcctcgcggtccagaccggcctcatcgagcttcaagtcatccaccgagccttc
ctcctctccatcatcctcttcattgttgttgcttctatcctacagtccatgctggagata
gctgaccccatagtcctggccctgggagcatcaagagacaagagtttgtggaaacacttc
agagcggtgtctctctgtctgttcctgctgatctttccagcctacatggcctatatgatc
tgtcagttcttccacatggacttctggctactcatcatcatctcctcctccatcctcaca
tcactgcaggttctcggcactctgctgatctacattctcttcatggtggaggagtttcga
aaggctccggtagagaacatggatgaagtgatctactatgtcaacgggacgtacagattc
ctggagttcctggttgcggtgtgtgtggtgtgctacggcgtgtcagagacggtatttggg
gagtggagtgtgatgggcagcaccatcatcctggtccactcgtattataacgtctggctc
agagcccagctgggctggcagagcttccttctcaggagagatgctgtaaacaagatcaaa
agcctccccacggccagcaacacacagctggaacagtacaacgacatctgtgctatctgc
taccaggacatgaacaacgctgtgatcactccatgcagtcatttcttccacgctggctgt
ctgaagaaatggctttatgtccaggagacgtgccccctctgtcactcgcaactcaaaagc
caatcaccaaccaccacccaagaggccccggcggccaatcagatccccgcagggcaagag
gaagccccggtggataagaagctgaaagatgacgctcctccagatgatgcgaagaaggag
ggagcagcagagcaggagggagataatgaacctactacgtcagctggcaaatcctcctcc
tcctcctcctcctcctcctcctcctcctctggtgtgccctcgactccccagcaccttgcc
gagactccatcttcctcttcctctcctcccccactgactgaatctcagaagcagtcgctc
acagatcagccttcttcgtcttccgcctcttcctctgccacaatggacttgcccccgtct
cctccatcaccctcccacgtctcctcctcctcacagccaccggcccaggcagcgatgaac
cccgctgaacctgagcccagccctcaactaaaccgaggcttcttacttggcagcaaggag
tcacctcctgctccatcatcacatctgatggacccgccccctcccttacatgaggaacag
tctcctcctccatgcagcctctga
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