Anoplopoma fimbria (sablefish): 129113444
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Entry
129113444 CDS
T09102
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor 2-like
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04010
MAPK signaling pathway
afb04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129113444
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
129113444
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
afb01001
]
129113444
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
afb04090
]
129113444
Enzymes [BR:
afb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
129113444
Protein kinases [BR:
afb01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
129113444
CD molecules [BR:
afb04090
]
Proteins
129113444
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
VEGFR1-3_N_Ig-like
I-set
Ig_2
ig
Ig_PDGFR_d4
V-set
Ig_VEGFR-1-like_5th
C2-set_2
Ig_6
Motif
Other DBs
NCBI-GeneID:
129113444
NCBI-ProteinID:
XP_054481705
LinkDB
All DBs
Position
24
Genome browser
AA seq
1046 aa
AA seq
DB search
MKLSSLLLSIALSCCSAEDPPDPPSIRLNSDFLPNQKEVVLTAGSAFNLSCHGNRSVGLT
TTAFRLLYRDQLLDPVEVKRSDPRHTGTYRCGYIDQSLEHLDTWIHLYVKDPADPSSVFV
TPRRVPSVEEGQDFLFRCLLTDPSVTDLTLQSADSTGDKGRGLPQGMNVTFDPKRGALIR
DLQRSFKGRYVCSGWKDRRQFISRPVDLLVAPKLRHPPSLSISRDESVRLEGENFEVTCL
TSNPSHFYNLTWTHPNTKTLNVTFSRHYGNGHLYINSTLTFSAVSRTHSGTYTCTAVNEA
GVATATTQLRVLDGPYLRIYLQPMQQANTDTNTIEVNEALGANVSSMLMEVQGELEANIS
SSSLEFNGILVANVSTNHMHVNRNHSANVSGSSTVEVYEDRDVMLTFVILAYPPIRSQRW
TTTTHVNKDNNNTVHHESYATHSYRSEASLLLRRVHQEDRGRYSFHFENSFFDGSQNIAL
RIYRSPSAVISQENNTLTCCSSGYPLPTILWYICPGVQDTCGDVADYRLPPADVTSQDED
VRNHLTLPLSPGDDVTVECVAYNQMGESREVFNHRKDLSFFTPALIGALSSALLLLLLLL
VVFYKWRQKPKYEIRWKIIESTDGNNYTFIDPTQLLYNQKWEFPRDKLRLGAVVGSGAFG
KVVEATAYGLGTGNATRVAVKMLKPSAHSEEREALMSELKILGHLGYHDNIVNLLGACTR
GGPMLMITEYCSHGDLLNFLRAHAQDFMASVLSVDEVEGEAVYKNMATQNPRLRSDSGIS
CCSEYQEMHPVQSPGQTHLGVQTNSVSVGDLIRFSYQVAQGLDFLSTRNCIHRDVAARNV
LLTDRRVAKICDFGLARDIRNDDSYIVQGNARLPVKWMAPESIFQCVYTVQSDVWSYGVL
LWETFSLGRSPYPNIAVDTNFYKMIQDGRHMDKPDFAPAEMYQLMTLCWSLEPTDRPTFK
TIGQLINRLLPSTNDTSPQHRDQSTYKNINECREEEEEEEEEEGVRGGDALKRGEDCGRG
ERHDNDNDDDDDEEKEPMMKNIYQLS
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcagttctctgctgctgtcgatcgccctcagctgctgctctgctgaagatcct
ccggatcctccatcaatccgtctgaactctgacttcctgccaaaccagaaggaggtggtt
ctgaccgccggctccgccttcaacctcagctgtcatggcaaccgttcggtcggtttgacc
accactgcgttccgcctgctgtaccgggaccaactgctggacccggtggaggtaaagagg
tcagaccccagacacactgggacctaccgctgtgggtacatcgaccagagcctggaacac
ctggacacctggatacacctgtacgtcaaagacccagctgacccctccagtgtgtttgtc
acacctcgccgcgtcccttcagtcgaggagggccaggacttcctgttcaggtgtctgctc
accgacccgtccgtcaccgacctcaccctccaatcagcagacagcacgggggacaagggg
cggggcctgcctcagggtatgaacgtgacctttgaccccaagagaggagccctgatccga
gacctgcagaggtcgttcaaaggacgctatgtttgttcaggatggaaggacagaaggcag
ttcatatccagacctgtcgacctgctggtggcccccaagctacgtcatcctccctccctc
tctatcagtcgggatgaatcggtccgtctggaaggagagaacttcgaggtcacctgtctg
accagtaacccctcccacttctacaacctcacctggacacaccccaacacaaagacactg
aacgtcaccttcagccgtcactatggcaacggccacctgtacatcaacagcactctgaca
ttctccgccgtcagtcggactcacagcggcacctacacctgtactgctgtcaacgaagcc
ggagtcgccacggcaaccactcagctcagagtgctggatggcccctacctgagaatctac
ctgcagccgatgcagcaagctaacactgacactaacaccatagaggtcaatgaggccctg
ggtgctaatgttagcagcatgctaatggaggtgcaaggagagctagaagctaacattagc
agcagttcactggaattcaatgggatattagtcgctaatgttagcaccaatcacatgcat
gtgaacaggaaccacagtgctaacgttagcggcagtagcacagtggaggtgtatgaagat
cgagatgtgatgttgacctttgtgatcttagcatatcctccaatcaggagccagcgctgg
acgacaacaacacatgtcaacaaggacaacaacaatacggtgcaccatgagagctatgcc
acacacagctacaggtccgaggccagcttgctactgaggcgggtccatcaggaggatcga
ggtcgatactcgttccactttgagaactcgttcttcgacggctcgcagaacatcgccctc
cggatttaccgttctccaagcgctgtcatcagtcaggagaacaacactctgacctgctgc
agctctggatatccattacccacaatcctctggtacatctgccccggggtccaggacacg
tgtggagacgtcgccgactatcggcttcctccagctgacgtgacctcacaggacgaggac
gtgaggaaccacctgaccctgcctctgtcgcctggtgatgatgtcactgtggagtgtgtt
gcctacaaccagatgggagagtctcgtgaagtcttcaatcaccgaaaagatctttctttc
ttcactccggctctgattggagcactgagttcagctctgctcctcctcctgctcttattg
gtcgtcttttacaagtggagacagaaacccaaatatgagattcgatggaagatcatcgag
agcaccgatggaaataactacacctttattgaccccacccagctgctgtacaaccaaaag
tgggagtttcctcgagacaaactccgcctcggtgctgttgttggttcgggagcgttcggg
aaggtcgtcgaggcaacagcgtacggtcttggaaccggcaacgccactcgagtcgccgtc
aagatgctcaaaccgagcgctcactcagaggaacgtgaagctctgatgtcggagctgaag
atcctcggccatcttggttaccatgacaacattgtcaacctgttgggagcctgcactcga
ggaggtcctatgttgatgatcacagagtactgtagccatggcgacctgctcaacttcctg
cgggctcacgctcaagacttcatggcgtctgttctcagtgtggatgaagtggagggcgag
gccgtctataagaacatggccacccagaacccccgactcaggagtgacagtgggatttcc
tgctgttcagagtatcaggagatgcacccggttcagagtccaggacaaacacacctgggt
gtacagacgaacagtgtttctgtcggcgacctcatcaggttttcctaccaggtggctcag
ggtctggacttcctgtccaccaggaattgtatccacagagacgtagcagccagaaacgtc
ctgctgacggaccgccgtgttgcaaagatctgtgacttcggtttggcgcgagacatccgc
aacgacgacagctacatcgttcagggaaatgcccgtctcccagttaagtggatggctcca
gaaagcatctttcagtgtgtttacaccgtccagagcgacgtctggtcctacggagtcctt
ctgtgggagaccttctccctaggtaggagtccgtacccaaacattgccgtggataccaac
ttctacaagatgatccaagatggccgccacatggacaagccagacttcgccccagcagag
atgtatcagctgatgacgctctgctggagtttggagcccacagacagaccaacctttaaa
acgattggtcagctaattaacaggctcctcccctccaccaatgacacatcgccacaacac
agggaccagtcgacatacaagaacatcaacgagtgcagagaagaagaagaagaagaggag
gaggaggagggggtccgaggaggagacgcactgaagagaggagaggattgtggacgggga
gagcgccatgacaacgacaatgatgatgatgacgatgaggagaaggagccgatgatgaag
aacatctaccagctgtcctga
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