Anoplopoma fimbria (sablefish): 129113460
Help
Entry
129113460 CDS
T09102
Symbol
tbc1d8b
Name
(RefSeq) TBC1 domain family member 8B isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129113460 (tbc1d8b)
Membrane trafficking [BR:
afb04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
129113460 (tbc1d8b)
Endosome - Golgi transport
Rab GTPases and associated proteins
129113460 (tbc1d8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_7
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
129113460
NCBI-ProteinID:
XP_054481743
LinkDB
All DBs
Position
24:complement(17355031..17369512)
Genome browser
AA seq
1139 aa
AA seq
DB search
MWLKPDEILLKNAFKLWVTEEDNEYFVLQRRRGYGEGGGGLTGLLVGTLDTVLDSTSKVA
PYRILHHTPDSQVYWSIACGVTKEEIVQHWDWLQQNIMRTLSVFDSSEDITSFVQGKIRG
LIAEEGKTSLVLEEDPEKFREALLRFEKWFELPPKEKLVTYYSCSYWRGKVPCQGWLYLS
TNFLCFYSYLLGSEVKLIISWDEIWRLEKTSNVILTESIHVLANGEDHYFSMLMHLNETF
VIMEQLADYSIKRLFDKEAFQREPALSDPLQITKRGLEAHAKSEQFRTFFRLPKEENLLE
VHESFLWVPFSHFNTLGKICLSENYLCFASQDGSQCHVIIPMREVINVEKSDSSSRALTV
CMRGKRALRFSEVRDYQRLANTIRSRCGISASPQHSASSETIRGECQSLLNHFEDNPEDV
TLMVGQKDSSKAVSTEALMTVFHPQDVENLDPKMLKEKMKEQSWNIHFSEYGRGTSMFFT
KKTRDLIVRGVPEALRGELWMLFSGAVNDMATHPGYYTDLVEQSLGTSTLATDEIERDLH
RSLPEHPAFQSDTGISALRRVLTAYAYRNPKIGYCQAMNILTSVLLLYAKEEEAFWLLVA
VCERMLPDYFNRRIIGALVDQAVFEDLIRENLPQLVEHMTDLSFFSSVSLSWFLTLFISV
LPIESAVNVVDCFFYDGIKAILQLGLAVLDYNMGALISCHDDAEAVTILNKFFDSVTNKD
SPLPPTVQQASVGNNDKASNFNVDITELIREAYEKYGNIRSEEVESSRKRNKLHVIQTLE
DTTKQNVIRVVTQEVRFSPSHLDGLYNLFKRQHFLCCYWTMKSPALLHHDPSLAYLEQYQ
LGYQQFSVLFSLLEPWAFCSSKSPLSLWVFRLIDENQDGLVNFKEFCSALDTLYSGSFTN
KLKFLFKLHLPPAFTGSPLHLKEQRIQHFIPVTEDSSHLSRLTAFDLPEDGVIRKSPERG
RGKVDLQAYLKQWQNEILKKEETIKDLPRINQTQFIQFSKTLYNIFHGDPEEESLYRAVA
HVTSLLLRMEEVGRRLQEPISPSETTEPPDNAAAAAAVEEEPSTKDAPTSPESSGTSSSR
NSQDAGTDLTETQWSFSFEQVIASLLNEPTIVRFFERPVDVQSKLGQARVAQLKLKANK
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgtggctcaaacccgacgagatcctgctgaaaaatgcgttcaaactgtgggtgacggaa
gaggataacgagtacttcgtcctgcaaaggagacgaggttacggagaaggtggaggcggg
ttgacaggcctccttgtgggaactctggatactgtgttggactccacatccaaagttgct
ccttaccgaattctgcaccacacaccagactcacaggtgtattggtccatagcatgtggt
gtcaccaaagaggaaattgttcagcactgggattggctgcagcagaacatcatgaggaca
ctctctgtttttgactccagcgaagacatcaccagctttgtacagggcaagattagaggt
cttattgctgaggaagggaagacctccctggtgctggaggaagatcccgagaagttccgg
gaagcacttttgaggttcgagaagtggtttgagctgccaccgaaggaaaagctggtcaca
tattactcatgcagctattggagaggcaaagtgccctgccagggctggctctacctcagc
acaaacttcctgtgcttctattcatacctgctgggatctgaggtgaaactgatcatctcc
tgggatgagatctggaggctggagaaaacctctaacgttatcctgactgagagcatccat
gtcttagccaatggggaggatcactacttctctatgctgatgcaccttaatgaaacattt
gttatcatggaacagctggctgactactccatcaagcgcctttttgataaagaggccttc
cagagagagccagcgctctccgacccccttcaaattaccaagagaggcctagaagctcat
gcaaagagtgagcagttccggacgtttttcaggcttcccaaagaggaaaacctgttagag
gtgcatgagagcttcctgtgggtgcccttcagccattttaacactcttggcaagatctgt
ctgtctgagaactacctgtgtttcgccagccaagacggaagccaatgtcatgtcatcatt
ccaatgcgagaggttattaatgtcgagaagtcagactccagcagcagggctctaacggtg
tgtatgcgtggaaagagggcgctgcgtttctccgaggtgcgggactaccagcggcttgcc
aacacgatccgcagcaggtgtgggattagtgccagccctcagcactctgcatcatcagag
accatacgaggcgagtgccagtcactcctcaaccactttgaggacaacccagaggacgta
acgctgatggtgggacagaaagacagcagcaaggctgtaagcaccgaggctctcatgact
gttttccacccccaggatgttgaaaaccttgaccctaaaatgctgaaagaaaagatgaag
gaacagtcgtggaacatccatttctctgaatatggacgtggcacgagtatgttcttcacc
aagaagacacgggacttgattgttcgtggtgttcctgaggccttgagaggagagctgtgg
atgcttttttcaggagctgtgaacgacatggccacccatcccggctattacactgatctg
gttgaacagtctctgggcacaagcactttggctacagatgagattgagagagacttgcac
cgctctctgccagagcaccctgcctttcagagcgacacgggaatctcagctctacgcaga
gtcctcactgcctatgcatacaggaaccctaaaatcggctactgccaggccatgaacatt
cttacctcagttcttctgctctacgccaaagaagaggaggctttctggctcttagttgcc
gtctgtgagaggatgttgccggactactttaaccggcgcattattggtgctttggttgac
caggcggtgttcgaggatctgattagagaaaacctcccccagctggtggagcacatgaca
gacctgagtttcttctcatccgtgtccttgtcctggttcctcaccctattcatcagtgtc
ctccccatagagagtgctgtgaacgtggtggactgttttttctacgacggcataaaagcc
atcttgcagctcggcctggcggtgctggactacaacatgggggctctgatcagttgccac
gacgatgcagaggccgtcaccatcctcaacaaattcttcgacagtgtgacaaacaaagac
agccccctgcctccaacagtgcagcaagcttcagtgggcaataacgataaagcatcaaac
ttcaacgttgatatcactgaactcatccgagaggcctacgagaaatacggaaatatccgt
tcagaggaagtcgagagttcacggaaaagaaacaaactgcatgtgatccagacactggag
gatacgaccaaacaaaatgtgattcgggtggtgacacaagaagtccgattcagtccctca
catcttgacgggctttataacttgttcaaaaggcagcattttctgtgctgctactggaca
atgaagagtccagctctgctccatcatgaccccagcctggcctatttggagcagtaccag
ttgggttaccaacagttcagcgtgctcttctctctgctggagccctgggccttctgcagc
tccaagagccccctctccctctgggtcttccgcctgatagacgagaaccaggatggcctc
gtcaactttaaagagttctgctctgccctcgatactttgtacagtggatcgttcacaaat
aagctgaaattcctcttcaagctgcatctgccaccagcttttacaggtagtcctttgcac
ttaaaggaacaaagaatccagcactttattccagtgactgaagactcttcccacttgagt
agactcactgcatttgatctaccagaagatggcgtgataaggaaaagccctgaaagaggt
agagggaaagtggacctacaggcctacctgaaacaatggcaaaatgaaatacttaagaaa
gaggaaactattaaagacctaccccgaattaatcagactcagttcatccagttctccaag
acactgtacaacatcttccatggcgatccagaggaggagtctctgtaccgagccgtggcc
catgtgaccagtctcctcctgaggatggaggaggtgggacggaggctgcaggagccgatc
agcccatccgagaccacagaacctcccgacaacgctgctgctgctgctgcggtggaggag
gagccttcaacgaaagacgctcctaccagcccggagagctccggcacctccagctcccgc
aacagtcaggacgcagggaccgacctcacagagacacagtggtcgttttcgtttgagcag
gtcatcgcttctctgctcaacgagccgaccatagtccgcttcttcgaaaggcctgtcgac
gttcagtctaaactgggacaagctagggttgcccagctgaagctaaaggcgaataagtga
DBGET
integrated database retrieval system
