Anoplopoma fimbria (sablefish): 129113468
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Entry
129113468 CDS
T09102
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03030
DNA replication
afb03410
Base excision repair
afb03420
Nucleotide excision repair
afb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129113468 (rfc3)
03410 Base excision repair
129113468 (rfc3)
03420 Nucleotide excision repair
129113468 (rfc3)
03430 Mismatch repair
129113468 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afb03032
]
129113468 (rfc3)
03036 Chromosome and associated proteins [BR:
afb03036
]
129113468 (rfc3)
03400 DNA repair and recombination proteins [BR:
afb03400
]
129113468 (rfc3)
DNA replication proteins [BR:
afb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
129113468 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
129113468 (rfc3)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
129113468 (rfc3)
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
129113468 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
129113468 (rfc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
Rad17
AAA
AAA_22
nSTAND6
AAA_16
Sigma54_activ_2
AAA_11
DUF6165
ABC_tran
Motif
Other DBs
NCBI-GeneID:
129113468
NCBI-ProteinID:
XP_054481756
LinkDB
All DBs
Position
24:13823845..13826693
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPTSLGKLDYHKEQATQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQTIVAPSKKKIEINIIASNYHLEVNASDAGYQDRVVIQELIKTVAQSQQ
IQTSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILCSTSTSKVIGPIQSRCL
AIRVPLPSIEEVCSVLTSICKKEGLLLPPELAKHIAEKSGRNLRKALLMCEACRVQQYPF
SADQEVPQTDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPDIIMKGLVTELL
SNCDGQLKTEVAHMAAYYEHRLQLGSKAIYHLEAFTAKFMAIYKKFMEDGLDGMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtgggtggacaaatatcggccgacttccctcgggaaactcgactatcataaa
gagcaagcgactcagctgaaaaacctggttcaatgtggcgacttccctcacttgttggtg
tacgggccatcaggcgcggggaagaagacccgcatcatgtgtctgctgagggagctgtat
ggagccggggtggagaagctccgcatagagcaccagaccatcgtggctccctcaaagaag
aaaattgagattaacataatagccagcaactatcacttggaagtcaacgcaagtgatgct
ggataccaggaccgtgtggtgattcaagagctgattaaaaccgtggctcagtcccagcag
atccagacaagcacccagagagagttcaaagtggtgttgctgacagaggtggacagactc
acaaaagacgcccagcacgctctgcgccgaacaatggaaaagtacatgtccacctgccgt
ctcatcctctgctctacctccacctctaaagtcattgggccgatacagagccgttgtctg
gcaatcagagttcctctgccgagcatagaggaggtctgcagtgttttgacatcgatctgt
aaaaaggagggtctgctcctcccacctgagctcgccaaacacatcgctgagaagtctggt
cgcaacctccgcaaagcccttttgatgtgtgaggcatgcagagtgcagcagtatccattc
tctgcagaccaagaagtcccgcagacggactgggaggtctacctcagagaaaccgctaac
gccatcgtcagccagcagagccctcagaggttgctggaggttcgcgccaggctgtacgag
ctgctgactcactgcatccctcctgatatcatcatgaagggtctggtgacagagctgttg
agtaactgcgatggtcagctgaagacagaagtggcccacatggccgcctactacgaacac
agactgcagctgggcagcaaagccatctaccacctcgaggccttcaccgccaagttcatg
gccatctacaagaagttcatggaagacggtctggatgggatgatgttttga
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