KEGG   Anoplopoma fimbria (sablefish): 129113468
Entry
129113468         CDS       T09102                                 
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03030  DNA replication
afb03410  Base excision repair
afb03420  Nucleotide excision repair
afb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    129113468 (rfc3)
   03410 Base excision repair
    129113468 (rfc3)
   03420 Nucleotide excision repair
    129113468 (rfc3)
   03430 Mismatch repair
    129113468 (rfc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:afb03032]
    129113468 (rfc3)
   03036 Chromosome and associated proteins [BR:afb03036]
    129113468 (rfc3)
   03400 DNA repair and recombination proteins [BR:afb03400]
    129113468 (rfc3)
DNA replication proteins [BR:afb03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    129113468 (rfc3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    129113468 (rfc3)
Chromosome and associated proteins [BR:afb03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    129113468 (rfc3)
DNA repair and recombination proteins [BR:afb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     129113468 (rfc3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    129113468 (rfc3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA_lid_RFC1 Rad17 AAA AAA_22 nSTAND6 AAA_16 Sigma54_activ_2 AAA_11 DUF6165 ABC_tran
Other DBs
NCBI-GeneID: 129113468
NCBI-ProteinID: XP_054481756
LinkDB
Position
24:13823845..13826693
AA seq 356 aa
MSLWVDKYRPTSLGKLDYHKEQATQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQTIVAPSKKKIEINIIASNYHLEVNASDAGYQDRVVIQELIKTVAQSQQ
IQTSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILCSTSTSKVIGPIQSRCL
AIRVPLPSIEEVCSVLTSICKKEGLLLPPELAKHIAEKSGRNLRKALLMCEACRVQQYPF
SADQEVPQTDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPDIIMKGLVTELL
SNCDGQLKTEVAHMAAYYEHRLQLGSKAIYHLEAFTAKFMAIYKKFMEDGLDGMMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtttgtgggtggacaaatatcggccgacttccctcgggaaactcgactatcataaa
gagcaagcgactcagctgaaaaacctggttcaatgtggcgacttccctcacttgttggtg
tacgggccatcaggcgcggggaagaagacccgcatcatgtgtctgctgagggagctgtat
ggagccggggtggagaagctccgcatagagcaccagaccatcgtggctccctcaaagaag
aaaattgagattaacataatagccagcaactatcacttggaagtcaacgcaagtgatgct
ggataccaggaccgtgtggtgattcaagagctgattaaaaccgtggctcagtcccagcag
atccagacaagcacccagagagagttcaaagtggtgttgctgacagaggtggacagactc
acaaaagacgcccagcacgctctgcgccgaacaatggaaaagtacatgtccacctgccgt
ctcatcctctgctctacctccacctctaaagtcattgggccgatacagagccgttgtctg
gcaatcagagttcctctgccgagcatagaggaggtctgcagtgttttgacatcgatctgt
aaaaaggagggtctgctcctcccacctgagctcgccaaacacatcgctgagaagtctggt
cgcaacctccgcaaagcccttttgatgtgtgaggcatgcagagtgcagcagtatccattc
tctgcagaccaagaagtcccgcagacggactgggaggtctacctcagagaaaccgctaac
gccatcgtcagccagcagagccctcagaggttgctggaggttcgcgccaggctgtacgag
ctgctgactcactgcatccctcctgatatcatcatgaagggtctggtgacagagctgttg
agtaactgcgatggtcagctgaagacagaagtggcccacatggccgcctactacgaacac
agactgcagctgggcagcaaagccatctaccacctcgaggccttcaccgccaagttcatg
gccatctacaagaagttcatggaagacggtctggatgggatgatgttttga

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