KEGG   Anoplopoma fimbria (sablefish): 129113469
Entry
129113469         CDS       T09102                                 
Name
(RefSeq) ras-related protein Rab-39B-like
  KO
K07925  Ras-related protein Rab-39B
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:afb00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    129113469
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:afb04131]
    129113469
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:afb04031]
    129113469
Membrane trafficking [BR:afb04131]
 Autophagy
  Other autophagy associated proteins
   Rab GTPases
    129113469
GTP-binding proteins [BR:afb04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab39/42 [OT]
    129113469
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA GTP_EFTU AAA_22 TniB
Other DBs
NCBI-GeneID: 129113469
NCBI-ProteinID: XP_054481758
LinkDB
Position
24:15534689..15537548
AA seq 213 aa
METIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHNWLEEAQSHVQPHNIVFLL
VGHKCDLEAQRQVTQQEAEKLAGAFGMRYVETSARESINVEKAFVDLTKDIFELVRSGDI
KIQDGWEGVKSGLVPNTVHSSEEVTKGSRQCFC
NT seq 642 nt   +upstreamnt  +downstreamnt
atggagacgatatggctttatcagtttcgtctgatcgtcatcggagactccacagttggc
aagtcatgtctgatccggaggttcactgagggccgcttcgcccaggtgtcagacccgacg
gtgggggtggacttcttctctcgcctggtggagattgagccgggaaaaagaatcaaacta
cagatctgggacactgcagggcaggagaggttcaggtctatcaccagagcttactaccgt
aactcggtgggcgggctcctactcttcgacatcacaaaccgccgttccttccagaatgtc
cacaactggctggaggaggcccagagccacgtccagccgcacaacattgtcttcctgctg
gtcggtcacaagtgtgacctggaggcccagcgtcaggtgacgcagcaggaggcagagaag
ctggcgggggccttcgggatgcgctatgtggagacatcggcacgagaatctatcaacgtg
gagaaggcgtttgtggatctgacgaaggacatctttgagctggtacggagcggggacatt
aagatccaggatggctgggagggcgtcaagagtggattggttccaaacaccgtccattcc
tccgaggaagtcaccaagggcagccggcaatgcttctgctga

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