Anoplopoma fimbria (sablefish): 129113498
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Entry
129113498 CDS
T09102
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04080
Neuroactive ligand-receptor interaction
afb04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129113498
04082 Neuroactive ligand signaling
129113498
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129113498
Ion channels [BR:
afb04040
]
Ligand-gated channels
GABA-A
129113498
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
129113498
NCBI-ProteinID:
XP_054481805
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Position
24:complement(8872695..8926212)
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AA seq
525 aa
AA seq
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MAVFRIRRMRCFCVCFFPLVVSVMCVQSAGVNDPSNMSLVKETVDRLLKGYDIRLRPDFG
GPPVGVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLW
VPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL
EIESYGYTTDDIEFYWRGGHNAVTGVDKIELPQFSIVDHKLISKNVVFSTGSYPRLSLSF
KLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETL
PKIPYVKAIDMYLMGCFVFVFLALLEYALVNYIFFGRGPQRQKRAAEKLTLANNEKMRMD
PNKWLVGNVVGRDDTLYARMKQRDLDGHDTMWEPIFVDDGAIGLGDQKNKMDPHENILLG
TLDIKNDMGVSELALGLNDPRNTMLTYDSSTLQYRKAGLARHNFGRNTLECHMTQKKSRL
RRRASQLKINIPDLTDVNSIDKWSRMIFPTVFSFFNIVYWLYYVN
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgttcagaataagaaggatgaggtgtttctgcgtctgtttcttccctctggtg
gtgtccgtgatgtgcgtccaaagtgccggtgtcaatgaccctagcaatatgtctttggtt
aaagaaacggtggatagactgttgaaaggttatgatatacgattgaggccagatttcgga
ggtcctccggttggagtgggaatgaacatagacatagccagcatagacatggtgtcagaa
gtcaatatggactacacactgacgatgtactttcagcaggcctggcgagacaaacggctg
tcctactccgagatccctctcaacctgaccttagataaccgggtggctgaccagctctgg
gtccccgacacctacttcctcaatgacaaaaaatcgtttgtccacggtgtcacagtgaaa
aatagaatgatccgactgcacccggacggaaccgtactgtacggcctaaggattactacc
actgctgcttgtatgatggacctgagaaggtatccactggatgagcaaaactgcacactc
gagatagagagttatggctacactacagatgacattgagttctactggcgaggaggacac
aatgctgtgacgggggtggacaagatcgaattgccccagttttcaatcgtggatcataag
ctcatctccaagaacgttgtcttctccacaggttcttaccctcgtctgtccttgagtttt
aaactgaagaggaacattggatacttcatcctgcagacatacatgccttctatacttatc
acaatcctctcatgggtctccttctggatcaactatgacgcctctgctgccagagtggct
ctaggtattaccacggtgctgaccatgactaccattaacacccatctgagagaaaccctc
cccaaaatcccctacgtcaaggccatagacatgtacctcatgggctgctttgtctttgtc
ttcctggctctgctggagtatgcgctggtaaactacatattctttggacggggccctcaa
cgtcagaaaagggcagctgagaaactaactctagctaacaatgaaaagatgaggatggat
ccgaacaagtggctggtggggaatgtagttggcagagatgatactttgtatgcaagaatg
aaacaaagggatcttgatggtcatgacacgatgtgggaaccaatctttgtggacgacgga
gcaattggacttggcgatcaaaagaacaagatggacccacatgaaaacatccttttgggc
accttggacatcaagaacgacatgggcgtttcagagctggctctgggtctcaacgaccca
cgaaataccatgctgacatacgacagctcaactctacagtaccgcaaagcagggctggcc
aggcacaactttggtcgaaacacgctggagtgccacatgactcaaaagaaaagccgacta
cggaggcgtgcttcacagctaaagatcaacatcccagacttgactgatgtaaactctatt
gacaaatggtcgaggatgatcttcccgactgtcttctccttcttcaacattgtttactgg
ctttactacgtcaattaa
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