Anoplopoma fimbria (sablefish): 129113526
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Entry
129113526 CDS
T09102
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129113526 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129113526 (exosc8)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
129113526 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
NYN_YacP
Motif
Other DBs
NCBI-GeneID:
129113526
NCBI-ProteinID:
XP_054481842
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All DBs
Position
24:complement(13554170..13557133)
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AA seq
277 aa
AA seq
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MAAGFKVAEPLEYHRSFLKENCRPDGRDLSEFRTTTLNIGSISTADGSALVKVGNTTVIC
GIKAELTNPTVEAPGKGYIVPNVDLPPLCSSRFRPGAPGEQAQAASQFIADVIESSEIIQ
TEDLCIDRGKLCWVLYCDMMCLDYDGNMLDACIIALLAALKNTQLPEVTINTETSSPEVN
LEKRRGLHIHKHPVGTSFCVFDDSILIVDPTSEEESLATAHLTVVTDDEERLCIVHKPGG
TSLSGEKLQECINRATARQREIQKLIDKVINSVKTAQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggtttcaaagttgcggagcctctggagtaccacaggagctttctgaaagaa
aactgccgccctgatggacgggatctgtcagaattcagaaccacaacactcaacataggg
tccatatctacagcagatggctcagccctggtaaaggttggaaacaccacagtcatctgt
gggatcaaagcggagctgacaaacccaacagtggaggcaccaggcaaaggttacatagtg
cccaacgtggacctgccgccgctgtgttcctctcggtttcggccgggtgcaccgggagag
caggcgcaggctgccagccagttcatcgctgatgtcatagaaagctctgagattatacaa
acagaggacttgtgcattgacagaggaaagctctgctgggtgctctactgtgacatgatg
tgtctcgactacgatgggaacatgttggacgcttgcatcattgccctgctggctgccctg
aagaacacacaactcccagaggtcaccatcaacacagagactagctcaccagaggtgaat
ttagaaaagagacgtgggctgcatattcacaaacatccagtcggaacctctttttgtgtc
ttcgatgactccatactgattgtagaccccacatctgaggaggagagtctggcgaccgct
cacctcactgtggtgaccgatgatgaagagcgactctgcattgtacataaaccaggtggg
acgtcactgtcaggagagaagcttcaggagtgtataaacagagcaacagcgagacaaaga
gagatccagaaacttattgacaaagtgataaacagtgtgaagacagcacaataa
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