Anoplopoma fimbria (sablefish): 129113604
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Entry
129113604 CDS
T09102
Symbol
lrwd1
Name
(RefSeq) leucine-rich repeat and WD repeat-containing protein 1
KO
K24733
leucine-rich repeat and WD repeat-containing protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129113604 (lrwd1)
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
129113604 (lrwd1)
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Gene cluster
GFIT
Motif
Pfam:
WD_LRWD1
LRR_LRWD1
LRR_4
LRR_8
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_SPT8
WD40_Prp19
LRR_9
LRR_14
Motif
Other DBs
NCBI-GeneID:
129113604
NCBI-ProteinID:
XP_054481974
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Position
24:complement(8203383..8213250)
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AA seq
766 aa
AA seq
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MEKITEKLLLEKGSPKTNKLDQIKTLNLSKLGLNPQDLPVRLLSRLQSLERWDLSGNRLQ
EVPKNLELPALRYLDLSDNQMEDVTTLESLSGLEELKMEDNLYITVSDNYKLMSLLPKLR
IYNGKDVSTTANHLRYVYSENLRTRIIAVWEKSFSLPDPVTAEKMSSLEKNFVNTARQQV
KYGPSSVSDFTKWRVEIIAKEYLRSLTDPKEEPESKGSPDTKENSEVSTPTKRKQTVLVD
TSISLTPRKKLRSDLPVSSVKASPRKSSISLTPLKKLRSDPPVSPVESSPRKSSLSRKLQ
TLTQTSTVRMSPRKLSQPPSTPTRGQTRAETPKRGSQVRKTKEDDGAQIKQKGRTEHQRD
AELLPSIKIGSRTQPVCLKPLHVLQCHSKQDSSEDFSTQLWACAFQPLPDSTGAGGGGRL
VATCGGDSLCVIDCEAGMVMKKYKVPGEEFFSLAWSTVLMSRGGGASAQHCSILAAGGKR
GLVKLIHPRNNVAYGEFRASRKALSVLRFNHHQGNFLFTGSYDKKILMWDIGGVDSQYNY
KVVQLLVLETSTTPLHICLPPTSPSAHLLTACEDGLHCYNTLLGNNNTTKRTKEMEINFP
IYKKEDKDHDYHTVDGLSFLTDDIVASKNYMHCSIYLWSWSRTKSQRPDKKDRAVCAVVL
AELQWASTEIPYLALNTCPGQAYIVCGDDKGRLWTYHVSNLQKNSLHTGKPILPTEVLEW
PTPVRKDQGQVAGPSINSVAMDPELHFLVALSDKNMVIVWKRENSS
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaataacagagaaactcttactggagaaaggctctccaaaaaccaacaagctg
gatcaaatcaagacactgaatctatccaagctcgggctgaaccctcaggacctgccggtc
aggctgctgtcccgtctccagtccctggagcggtgggatctctctgggaacagactgcag
gaggtgcccaagaacctggagcttcctgcgcttcgctacctggacctcagcgacaaccag
atggaggatgttaccacgctggagtctctcagcggtctggaagagctcaagatggaggac
aatctctatatcactgtgagtgataattacaagctgatgtcgttgttgcccaaactgagg
atttacaacggtaaagatgtcagcactactgccaaccacttacgctacgtctacagtgag
aacctgaggaccaggataatcgcagtgtgggagaagagcttctctctcccggatcccgtc
acagcagagaaaatgtcctccttggagaaaaactttgtcaacactgcccgtcagcaggtt
aaatatggacccagctcagtcagtgacttcaccaaatggagggtggagattattgctaag
gagtatctgcgctctctgacggacccaaaggaagaaccggagagcaaggggtctccagac
accaaagagaacagtgaggtatcaacgcctacaaagaggaaacaaactgtattagttgac
accagcataagcctgacgcctcgcaagaaactgcgctcagatctcccagtctcctccgtt
aaagccagtcctcgcaagtccagcataagcctgacgcctctcaagaaactgcgctcagat
cctccagtctcccccgttgaatctagtcctcgcaagtccagcctcagccgcaagcttcag
acgctaacccagaccagcaccgtcaggatgagcccccgcaagttaagtcagcctccctca
acccccaccagaggtcagacgagggcggagacgcccaagagaggatctcaagtgagaaaa
accaaagaggatgatggagctcagataaaacagaaaggccgaacagagcaccagagagac
gctgaattactgccctcaataaagatcggcagcagaacacagccggtgtgtctgaagcct
ctccacgtcctccagtgccacagtaaacaggacagctcggaggacttctccacccagctg
tgggcctgtgctttccagccgctgccagattccactggcgctggaggaggaggccgattg
gtcgctacctgtggtggagactctctgtgtgtaattgactgtgaagccgggatggtgatg
aagaagtacaaagttcctggagaggagttcttctccctcgcctggtccacagtgttgatg
tccagggggggcggggcctcggctcagcactgcagcattctggccgctggtgggaaaagg
ggactggtcaagctgatccatcccagaaacaacgtggcctacggggagttccgggccagc
cgcaaggcgctgtctgtcctccgcttcaaccaccaccagggaaacttcctcttcacgggc
tcgtacgataagaagatcttgatgtgggacatcggtggagtggatagccagtacaactac
aaagttgttcagctgctcgtgttggagaccagcaccacccctctgcacatctgcctcccc
cccacttcccccagcgctcacctactgactgcctgtgaggacggcctgcactgctacaac
acactactcggcaacaacaacaccacaaagaggaccaaggagatggagataaatttccct
atatacaagaaggaagacaaagaccacgactaccacactgttgatggccttagttttctt
acggatgacatagtggcctccaagaactacatgcattgttccatttatttgtggagctgg
agcagaaccaagtcccagcggccggacaagaaggacagggcagtttgtgctgtggttctg
gctgagctgcagtgggccagcactgagattccatacctggctctcaacacctgcccaggc
caagcctacatagtgtgtggtgatgacaaaggcaggctgtggacataccacgtctccaac
ttgcagaaaaacagtctccacactggaaaacccatccttccaactgaggtgttggagtgg
ccgaccccggtaaggaaggaccagggccaggtggcgggcccctccatcaacagcgtagca
atggaccctgagctccacttcctggtggccttaagtgacaagaatatggtgatcgtgtgg
aagagagagaattcctcctga
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